Pairwise Alignments

Query, 247 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 50.8 bits (120), Expect = 3e-11
 Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 23/192 (11%)

Query: 5   APTFWVALLQIIWIDLLLSGDNAVVIALACRSLPAKQRKWGILLGAGAAVGLRILFALAV 64
           +PT WVAL  +I ++++L  DN + I++    LP + R     +G   A+ LR+     +
Sbjct: 10  SPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLGLLSTI 69

Query: 65  SYLLGV---------------PFLKVVGGLLLFWIA---IKLVTDNGGDSHEVAASD--- 103
           ++++ +                 + + GGL L W A   I    D   +  E +A +   
Sbjct: 70  AFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSAGNVVA 129

Query: 104 -SLWKAVRTIAIADAVMSLDNVVAIAAAARGHWELFVFGLLLTIPLIIFGSQLLLSLLTR 162
                A+  I + D V S+D+++  A     H  + +  ++ ++ +++  ++ L   +  
Sbjct: 130 IGFAAAIGQILLLDLVFSIDSIIT-AVGMTEHLPIMIIAVVTSVIVMLVAAEPLAKFIND 188

Query: 163 FPILIWAGAALL 174
            P ++      L
Sbjct: 189 NPTVVMLALGFL 200



 Score = 28.9 bits (63), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 22/31 (70%)

Query: 98  EVAASDSLWKAVRTIAIADAVMSLDNVVAIA 128
           ++AAS + W A+ T+ + + V+ +DN++ I+
Sbjct: 6   QLAASPTAWVALATLIVMEIVLGIDNLIFIS 36