Pairwise Alignments

Query, 247 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 250 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score = 54.7 bits (130), Expect = 2e-12
 Identities = 39/192 (20%), Positives = 84/192 (43%), Gaps = 23/192 (11%)

Query: 5   APTFWVALLQIIWIDLLLSGDNAVVIALACRSLPAKQRKWGILLGAGAAVGLRILFALAV 64
           +PT WVAL  ++ ++++L  DN + I++    LP + R     +G   A+ +R+     V
Sbjct: 10  SPTAWVALATLVAMEVVLGIDNLIFISILTNKLPVEYRSKARRIGISMALVMRLALLSTV 69

Query: 65  SYLLGV---------------PFLKVVGGLLLFWIAIKLVTDN---GGDSHEVAASDSLW 106
           ++++ +                 + + GGL L W A K + +N    G   E   S ++ 
Sbjct: 70  AWIVQLTDPVFEVFGNAFSWKDVILIAGGLFLLWKATKEIHENVDPHGAKEEAKVSSTVT 129

Query: 107 ----KAVRTIAIADAVMSLDNVVAIAAAARGHWELFVFGLLLTIPLIIFGSQLLLSLLTR 162
                A+  I + D V S+D+++  A     H  + +  ++  + +++  +  L + +  
Sbjct: 130 LGFAAAIFQILLLDIVFSVDSIIT-AVGMTEHLPIMIIAVITAVIVMMVAADPLANFIND 188

Query: 163 FPILIWAGAALL 174
            P ++      L
Sbjct: 189 NPTVVMLALGFL 200



 Score = 29.3 bits (64), Expect = 8e-05
 Identities = 11/31 (35%), Positives = 21/31 (67%)

Query: 98  EVAASDSLWKAVRTIAIADAVMSLDNVVAIA 128
           E+AAS + W A+ T+   + V+ +DN++ I+
Sbjct: 6   ELAASPTAWVALATLVAMEVVLGIDNLIFIS 36