Pairwise Alignments

Query, 235 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 250 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 57.4 bits (137), Expect = 3e-13
 Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 29/211 (13%)

Query: 5   SPVLWLALLQIIWINVLLSGDNAVVIALACRSLPEKVRRTGIILGAGVAVGLRIIFTGIV 64
           SP  W+AL  +I + ++L  DN + I++    LPE+ R     +G  +A+ LR+     +
Sbjct: 10  SPTAWVALATLIVMEIVLGIDNLIFISILTNKLPEQHRAKARRIGISMALVLRLGLLSTI 69

Query: 65  ATLL------------ALPW---LKLVGSLALMWIAVDLA--SPDEGGEEAIQSSDNL-- 105
           A ++            A  W   + + G L L+W A      S D   EE   S+ N+  
Sbjct: 70  AFIVQLTAPVFEVFGQAFSWKDMILIAGGLFLVWKATTEIHHSMDPEPEEKETSAGNVVA 129

Query: 106 ---WKAVGTVAVADIVMSLDNVVAVAAIADGNWFLLIFGLAISIPLIIAGSSLVMSLINR 162
                A+G + + D+V S+D+++    + + +  ++I  +  S+ +++  +  +   IN 
Sbjct: 130 IGFAAAIGQILLLDLVFSIDSIITAVGMTE-HLPIMIIAVVTSVIVMLVAAEPLAKFIND 188

Query: 163 FPLLVWAGAALLGWVAGDMLLGDVAIIERLG 193
            P +V      L      +++G   I E  G
Sbjct: 189 NPTVVMLALGFL------IMIGMTLIAEGFG 213



 Score = 27.7 bits (60), Expect = 2e-04
 Identities = 9/34 (26%), Positives = 22/34 (64%)

Query: 99  IQSSDNLWKAVGTVAVADIVMSLDNVVAVAAIAD 132
           + +S   W A+ T+ V +IV+ +DN++ ++ + +
Sbjct: 7   LAASPTAWVALATLIVMEIVLGIDNLIFISILTN 40