Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 80.1 bits (196), Expect = 8e-20
 Identities = 94/361 (26%), Positives = 153/361 (42%), Gaps = 35/361 (9%)

Query: 4   KIVALGLALAAFVAGPASAAEKLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYITGGTI 63
           +++A  +A   F     + AE+  +  +  ++ D I     + F KD+GV++ Y    T 
Sbjct: 6   RLLAPFIAATLFAGALHAQAEQRTLRVY--NWFDYITPQTLTAFQKDSGVKLVYDIFDTN 63

Query: 64  DRLNKAKLAKGSPESDITFTTAHVGWLYANDDLFETLDLSKMPNASKLVPQAKV-----S 118
           + L +AKL  G+   D+   +           +F+ LD SK+PN   L P          
Sbjct: 64  EAL-EAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPNWQHLDPALMKLIEAND 122

Query: 119 PYHIGAWAYVY---TIGYRPDLTPKNINFSSWADLWN--------PELKGMLAAPDFDPS 167
           P +  A  Y+Y    IG+ P      +  ++  D W+         +LK    A    PS
Sbjct: 123 PGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEENIAKLKQCGVALLDSPS 182

Query: 168 HIIAVSALLAG-----GSPADWQKGEQKLLALKPNFKAFYTND-----ANSQQLIATGET 217
            I+ ++    G       PAD++K E+ +L ++P+   F+++      AN    +A G +
Sbjct: 183 EILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKYMADIANGDICVAVGYS 242

Query: 218 PVQIMLSMNAYYMIAQGVPIKLVIPKEGGVLGIDTMAIMKGSKNRELAEKFINTALDPEV 277
                 + N       GV + + +PKEG  +  D +AI KG+ N E A  FIN  L PEV
Sbjct: 243 G-SFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAANPEDAHTFINYLLRPEV 301

Query: 278 QGKIAELKKGSPTV---LGAKVSAETAKLPGVFTTAEQWDKETIIIDHKLRAEKTAEWRK 334
              I++   G P        KV+      P ++ TAE   K   +      AE+ A  R 
Sbjct: 302 IAPISDF-VGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTLKPLTRNAER-ARTRA 359

Query: 335 W 335
           W
Sbjct: 360 W 360