Pairwise Alignments

Query, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

Subject, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 87/338 (25%), Positives = 147/338 (43%), Gaps = 20/338 (5%)

Query: 8   LGLALAAFVAGPASAAEKLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYITGGTIDRLN 67
           L  +L       A AA+ L   +WGG+ +D   EA A  FTK T ++V    G T     
Sbjct: 11  LSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQ-DGPTDYGKL 69

Query: 68  KAKLAKGSPESDITFTTAHVGWLYANDDLFETLDLSKMPNASKLVPQAKVSPYHIGAWAY 127
           KA +  G+ + D+    A      A++ L E LD +++    K+ P+  VS + +G++ +
Sbjct: 70  KAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQI-KRDKIDPRF-VSDHGVGSFFF 127

Query: 128 VYTIGYRPDLTPKNINFSSWADLWNPELKGMLAAPDFDPSHIIAVSALLAGG------SP 181
            + +GY       N     W  L++ +      A    PS  +   ALLA G       P
Sbjct: 128 SFVLGYNEGKLGAN-KPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADGVAPDKLYP 186

Query: 182 ADWQKGEQKLLALKPNFKAFYTNDANSQQLIATGETPVQIMLSMNAYYMIAQGVPIKLVI 241
            D  +  +KL  +K +   ++   A SQQL+A+GE  +    +   Y +   G P+   +
Sbjct: 187 LDLDRAFKKLDTIKQDI-VWWGGGAQSQQLLASGEASLGQFWNGRVYALQQDGAPVG--V 243

Query: 242 PKEGGVLGIDTMAIMKGSKNRELAEKFINTALDPEVQGKIAELKKGSPTVLGAKVSAETA 301
             +  ++  D + I KG+KN+E A KF+  A   E Q + A     +P  + +    +  
Sbjct: 244 SWKQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVDSVAKLDKD 303

Query: 302 KLPGVFTTAEQWDKETIIIDHKLRAEK----TAEWRKW 335
             P + T   Q   + + +D    A+      A W +W
Sbjct: 304 LAPNLPTAYAQ---DQVTLDFAYWAKNGQAIAARWNEW 338