Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 275 a.a., Polyamine ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  150 bits (380), Expect = 2e-41
 Identities = 86/250 (34%), Positives = 137/250 (54%)

Query: 28  LVVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRDFSEGFRNGLIITAFAS 87
           L++ F+ILP +V+   +FN  + L +P Q +S +W+   F   ++    +N +I+   A+
Sbjct: 23  LILLFLILPVLVIVPLSFNSGSFLVYPLQGFSLQWYQDFFGSAEWMRALKNSIIVAPAAT 82

Query: 88  SIALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALV 147
            +A+V G   A  L R  F GK  + A++ SP+V+P   IG+   +  A +    +F  +
Sbjct: 83  VLAMVFGTLAAIGLTRGDFPGKSLVMALVISPMVVPVVIIGVASYLFFAPLGMGNSFTSL 142

Query: 148 IVCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLF 207
           I+ H VL +PFV+ +V  +L+  +  L  AAASLGA P  A   VTLPL+ PG+ SG LF
Sbjct: 143 ILVHAVLGVPFVIITVSATLQGFNYNLVRAAASLGASPLLAFRRVTLPLIAPGVISGALF 202

Query: 208 AAILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIANAF 267
           A   SF+E   +LF+      TLP  M++ +RE   PT+AA + + I  + L+L      
Sbjct: 203 AFATSFDEVVVTLFLAGPEQATLPRQMFSGIRENLSPTIAAAATLLIAFSVLLLLTLEWL 262

Query: 268 LGLGKVLNVE 277
            G  + L  +
Sbjct: 263 RGRSEKLRTQ 272