Pairwise Alignments

Query, 280 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Azospirillum sp. SherDot2

 Score =  144 bits (362), Expect = 3e-39
 Identities = 87/244 (35%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 29  VVAFIILPAVVVGISAFNDRAILSFPPQAWSTRWFARAFSYRD-FSEGFRNGLIITAFAS 87
           ++ F++ P + V   +F+    LS+P    S +W+ +  +    +    RN LI+   A 
Sbjct: 20  MMVFLVGPILAVIPISFSSAGFLSYPIPGLSLQWYDKVLAASGPWLPALRNSLIVGTGAM 79

Query: 88  SIALVVGAGFAFALDRYSFRGKMALEAVLTSPLVIPHFTIGLGFLILAAQIHATRTFALV 147
           ++A V+G   A  L R     +  L  +L +P+V+P    G+    L A+I  T ++A +
Sbjct: 80  ALATVLGTLAALGLARNDLPVRSFLLGLLIAPMVVPVVISGVAMYFLFARIGLTASYAGL 139

Query: 148 IVCHVVLVLPFVMRSVYVSLRNLDSRLELAAASLGARPGRALFTVTLPLLIPGLFSGWLF 207
           I+ H VL  PFV+ +V  +LRN D+ L  AA SLGA P RA  TVTLPL++PG+ SG LF
Sbjct: 140 ILAHAVLGAPFVVITVTATLRNFDTTLVRAAYSLGASPVRAFLTVTLPLILPGVLSGGLF 199

Query: 208 AAILSFNEFTASLFVTAQATQTLPVAMYNYVREYADPTLAALSVIYIVVTALVLTIANAF 267
           A I SF+E   +LF+     +TLP  M++ +R+  DP++ A+S + + VT + + +  A 
Sbjct: 200 AFIFSFDEVVVALFIGGPEQRTLPRQMFDGIRDTIDPSILAMSTLLVGVTIVFMGLL-AR 258

Query: 268 LGLG 271
           LG G
Sbjct: 259 LGRG 262