Pairwise Alignments

Query, 370 a.a., Inner membrane ABC transporter permease protein YejB from Xanthobacter sp. DMC5

Subject, 336 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  142 bits (358), Expect = 1e-38
 Identities = 102/376 (27%), Positives = 174/376 (46%), Gaps = 57/376 (15%)

Query: 1   MLAYIVRRIALMVPTILGIMLVSFVVIQFAPGGPVERVIAQLTGEDVSATSRVSGGGSDF 60
           ML++I RR+ L++PT  GI L++F +I+  PG PVE ++                     
Sbjct: 1   MLSFIARRLGLLIPTFFGITLLTFALIRLIPGDPVEVMM--------------------- 39

Query: 61  SGAGAAAQAGAAAEMSSKYRGAQGLDPAFIKELEKQFGFDKPPHERFLKMITDYATFNFG 120
                               G + +DP    +  ++ G +KP   ++L  +   A  + G
Sbjct: 40  --------------------GERRVDPEMHAQAMERLGLNKPLPVQYLDYVGKLAQGDLG 79

Query: 121 KSYFRDISVLELIGEKMPVSISLGLWMTLITYLISIPLGIGKAMRDGSRFDVWTSAVIIV 180
           +S     SV        P ++ L     L   ++ +  G+  A++ GS FD     + + 
Sbjct: 80  ESLRTRESVWREFLTLFPATLELAFAALLFAGVVGLLAGVIAALKRGSLFDHGVMGISLA 139

Query: 181 GYAIPSFLFAILLIILFAGGS-----------FLDLFPLRGLTSENFWQMSWPERIADYA 229
           GY++P F + ++LI+ F+                D+ P  G    +           D  
Sbjct: 140 GYSMPIFWWGLILIMFFSVSLGWTPVSGRIDLLYDIEPKTGFMLIDTLLSDEEGAFKDAV 199

Query: 230 WHLVLPLTSMVLGAF--ATMTLLTKNSFLEEIRKQYVTTARMKGLSESRVLYGHVFRNAM 287
            HL+LP  ++VLG    A +  +T++S LE +R+ Y+ TAR KGLS +RV++ H  RNA+
Sbjct: 200 MHLILP--AIVLGTIPLAVIARMTRSSMLEVLREDYIRTARAKGLSPARVVFVHGLRNAL 257

Query: 288 LIVIAGFPSAFIAAFFSGSLLIETIFSLDGLGLLGFESVLNRDYPVVFATLYIFSLAGLI 347
           + V+  F    +    +G++L ETIFS  G+G    E++  RDYPVV   + + +   ++
Sbjct: 258 IPVLTVF-GLQVGTLLAGAVLTETIFSWPGIGKWLIEAIGARDYPVVQNGILLIACLVIL 316

Query: 348 VGLISDLTYMLVDPRI 363
           V  + D+ Y L +PRI
Sbjct: 317 VNFVVDILYGLANPRI 332