Pairwise Alignments

Query, 406 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 87.0 bits (214), Expect = 9e-22
 Identities = 97/406 (23%), Positives = 168/406 (41%), Gaps = 17/406 (4%)

Query: 8   RRAMLASSVA--AVAALRGGAS-ALAQQDTFKIGILTDMTGTFSDLGGPGTGVAAQIAIE 64
           RR +L + +A  A+ +L  GA  A A Q     G L  M+G F+  G     + +++AI 
Sbjct: 3   RRTLLKAGLALGALGSLPLGAHRAFADQPLTFYG-LKSMSGAFASYG-KYADMGSRLAIA 60

Query: 65  EVGGQVLGRKVELLIADHQQKANVGLAIAREWIERRDLKAFVDVMNSGIALGVNKLAADF 124
           E   Q+LG  ++  + D +  A   +   +E I +   + F     S  AL V+K     
Sbjct: 61  E-HPQLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKA 119

Query: 125 QRLAFYSSAATDRITEDQCTEYGFAWNTDTYA---QTNAMASSMIAEGLDTWFFIVADYE 181
             + F +    D IT   C    F W+  TY    +T    S  + +    W+ I   Y 
Sbjct: 120 GGV-FMTPVGADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQA-KRWYTITPQYV 177

Query: 182 FGHAMQASMDAAVKRAGGKVLGAVRHPLQTLDFSSYLLQAQASKAKVIAIASGGNDTVNT 241
           FG A+  +        G + +G   H LQ  +FS YL  A A+K  V+ + + G+   N 
Sbjct: 178 FGDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNA 237

Query: 242 IKQAQEFGLTQRGQKIVALLPYLSDIHAVGLPTMKGLRFIDPWYWDMDDK--SRAFANRF 299
           ++QA  FG+  R + ++     L     +G   ++G+ ++   YW   D   ++      
Sbjct: 238 LRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGV-YLGAQYWHQVDTPLNKLLVAAT 296

Query: 300 FERFKKMPTSVQASVYSSTLQYLKAVQAINSDDPFKIRDYLLKQTFNDAFSRNGKLQPNG 359
            + +   P    A+ Y  T   L+A+    S D   +   L    F            + 
Sbjct: 297 RKAYGINPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDH 356

Query: 360 RMVHDVYLVEVKAPTDSKREWDYLKVLATVPADKAFRPVSESACKL 405
           +++ D YL+  K     + E D  +V++   + ++F  V  + C L
Sbjct: 357 QVLKDYYLLRGKPQGQMRDEDDLAEVIS---SGRSFVEVDHTGCAL 399