Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 495 a.a., putative Urea ABC transporter from Pseudomonas putida KT2440

 Score =  157 bits (396), Expect = 6e-43
 Identities = 109/296 (36%), Positives = 157/296 (53%), Gaps = 17/296 (5%)

Query: 6   LDALYGQLVVGLINGSFYALLSLGLAVIFGLLRVANFAHGAQFMLGAFSA----LLLMRY 61
           L  L GQ   GL  GS   L +LGLA+ FGLL V N AHG   MLGA+S     +LL R+
Sbjct: 196 LGELLGQAFSGLSLGSVLLLAALGLAITFGLLGVINMAHGEMLMLGAYSTYMVQVLLQRF 255

Query: 62  LN--IGYWPSLFL--APLIVGAVGVVFERLMLRRLYHLHHLYGMLLTFGFALVLQGVILD 117
               I ++P + L  A  +   VG+  ER ++R LY    L  +L T+G +L+L   I  
Sbjct: 256 APGAIEFYPLIALPVAFAVSAGVGMALERTVIRHLYG-RPLETLLATWGISLILIQAIRL 314

Query: 118 RFGASGAPYPAPPALRGGMDL-GFMFVPIYRLWVIVVAVVVCVATWLVIEKTKLGSYLRA 176
            FGA       P  L GG+ L   + +P  RL +I  A+ V + TWL++ +T+LG  +RA
Sbjct: 315 LFGAQNVEVSNPAWLSGGIQLLPNLVLPYNRLVIIGFALAVVLLTWLLLNRTRLGLNVRA 374

Query: 177 ATENPDLLRTFGVNVSTLLTATYGAGAALAGFAGVMAAPIYQVSPMMGADIIITVFAVVV 236
            T+N ++    GV+   +    +G G+ +AG  GV  + +  V P +G   II  F VVV
Sbjct: 375 VTQNRNMAACCGVSTGRVDMLAFGLGSGIAGLGGVALSQVGNVGPDLGQSYIIDSFLVVV 434

Query: 237 AGGMGSIPGAIITGFGLGMLEGVVKLVYPQ----AANSVIFAVMALVLLLRPAGLF 288
            GG+G + G++   FGLG+     KL+ PQ        +I A++ L +  RP GLF
Sbjct: 435 LGGVGQLAGSLWAAFGLGIAN---KLLEPQIGAVLGKILILALIILFIQKRPQGLF 487