Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  224 bits (570), Expect = 2e-63
 Identities = 113/285 (39%), Positives = 177/285 (62%), Gaps = 1/285 (0%)

Query: 6   LDALYGQLVVGLINGSFYALLSLGLAVIFGLLRVANFAHGAQFMLGAFSALLLMRYLNIG 65
           LD    QL+ GL  G  Y L+++GL +IFGLL   NFAHGA F+LGA+     +      
Sbjct: 2   LDLYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTG-N 60

Query: 66  YWPSLFLAPLIVGAVGVVFERLMLRRLYHLHHLYGMLLTFGFALVLQGVILDRFGASGAP 125
           +W +L +APL+V A+    ERL+++R+YHL H + +L+T G AL++Q   +  +G  G  
Sbjct: 61  FWLALLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKN 120

Query: 126 YPAPPALRGGMDLGFMFVPIYRLWVIVVAVVVCVATWLVIEKTKLGSYLRAATENPDLLR 185
              PP LRG + LG    P YRL++I  A ++ +  WL++E+T+ G+ +RA +E+ + + 
Sbjct: 121 IAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVS 180

Query: 186 TFGVNVSTLLTATYGAGAALAGFAGVMAAPIYQVSPMMGADIIITVFAVVVAGGMGSIPG 245
             G N+  L + T+  G  LAG AGV+ AP+    P +G +I+   F VVV GGMGS  G
Sbjct: 181 LLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGG 240

Query: 246 AIITGFGLGMLEGVVKLVYPQAANSVIFAVMALVLLLRPAGLFGK 290
           A++ G  +G+++ ++  ++PQ A+ +I+  MA V+L+RP GLFG+
Sbjct: 241 ALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285