Pairwise Alignments

Query, 292 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  134 bits (338), Expect = 2e-36
 Identities = 94/295 (31%), Positives = 154/295 (52%), Gaps = 19/295 (6%)

Query: 12  QLVVGLINGSFYALLSLGLAVIFGLLRVANFAHGAQFMLGAFSALL--LMRYLNIGYWPS 69
           QL+ GL  G+ Y L++LG  +++G+L + NFAHG  +M+GAF +L+  L+    +G    
Sbjct: 7   QLINGLTLGAIYGLVALGYTMVYGVLGMINFAHGTIYMVGAFISLITFLVATTVLGTSVP 66

Query: 70  LFLAPLIVGAV------GVVFERLMLRRLYHLHHLYGMLLTFGFALVLQGVILDRFGASG 123
           L L   +V A+      G   ER+  R L     L  ++   G +++LQ  +    GA  
Sbjct: 67  LALVLTLVAAMALTALWGWTAERVAYRPLRSAPRLAPLISAIGVSIMLQNFVAQAQGARA 126

Query: 124 APYPAPPALRGG---MDLGFMFVPIYRLWVIVVAV---VVCVATWLVIEKTKLGSYLRAA 177
              P PP  RGG   MD G   V +  + ++++A+   ++ V TW VI +T LG   RA 
Sbjct: 127 K--PLPPVFRGGITLMDSGDFVVSLSWMQMVIMALTLALMAVFTW-VITRTALGRAQRAC 183

Query: 178 TENPDLLRTFGVNVSTLLTATYGAGAALAGFAGVMAAPIYQVSPM-MGADIIITVFAVVV 236
            ++  +    G++V  +++ T+  GA LAG AG+M    Y V    +G    I  F   V
Sbjct: 184 EQDMKMASLLGIDVDRVISTTFVIGAGLAGVAGMMVTLYYGVIDFYIGFLAGIKAFTAAV 243

Query: 237 AGGMGSIPGAIITGFGLGMLEGVVKLVYP-QAANSVIFAVMALVLLLRPAGLFGK 290
            GG+GS+PGA++ G  +G++E      +  +  +   F+++  VL+ RP GL G+
Sbjct: 244 LGGIGSLPGAMLGGLLIGLIEAFWSAYFSIEYKDVATFSILVAVLVFRPTGLLGR 298