Pairwise Alignments

Query, 348 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 8e-33
 Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 28/333 (8%)

Query: 18  PMGFSRGGIALAVLSGAAALLPLVTADSFLIHSAIMVLFFAYMATSWNFLCGYVGQLSLG 77
           P+   R    L+++  +   LPL+   + L   A  +L FA  A + N L GY G LS G
Sbjct: 8   PVAKGRAPALLSLVVASLVALPLLLPSATL---ATEILIFAMAALACNLLLGYTGLLSFG 64

Query: 78  HAMFSGVGGYVSVLLFTTYGLSPWIGMLVGGLVAAALSVFIGYPTFRLKGPYFALTTIAF 137
             +F GVG Y + LL        +  +L   +  A L++ +G    R  G YF + T+AF
Sbjct: 65  QGIFFGVGAYGAALLMIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAF 124

Query: 138 AEIVRIWVENTDSFLGFRIKGAEGLV-VPGVGGDSFWAFQFSGKV-------PYYYIILA 189
           +++          + G    G  GL+ VP          + +G V        ++Y+ +A
Sbjct: 125 SQMAYFLAYTLSGWTG----GDNGLLDVPRPN------IEIAGHVLVDLADPRHFYVFVA 174

Query: 190 MLVLAILATMV-MERSKLGYCLKAIRGDRDAAEALGISPTRYTQAAFAISAFMTALGGSF 248
           +L L I A  + + RS  G  L AIR +   A A+G     +    F +S  +T + G+ 
Sbjct: 175 VLFLLIFAAALRVIRSPFGSTLLAIRENETRAAAIGYDTRHFKILVFMLSGAITGIAGAL 234

Query: 249 YAQFFRYINPERNMGLELSIDMALMSIIGGQGTPFGPLVGALLLMPLGEISRGYLGGQFL 308
           YA    +  P  N+ L +S ++ +M+I+GG G+ FG L+GA  ++ LG++       +  
Sbjct: 235 YAMLLHFA-PLSNIDLMMSENILIMTIVGGTGSLFGSLLGAGAIVLLGDVL-----SELW 288

Query: 309 GLHLVIYGIVLMITVLYFPKGLIAPITALANRL 341
              L++ G++L++ V++   GL   +T L  RL
Sbjct: 289 PRWLMLLGVILILVVVFMRGGLWGGLTELGKRL 321