Pairwise Alignments

Query, 348 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 330 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  193 bits (491), Expect = 5e-54
 Identities = 120/315 (38%), Positives = 176/315 (55%), Gaps = 12/315 (3%)

Query: 22  SRGGIALAVLSGAAALLPLVTADSFLIHSAIMVLFFAYMATSWNFLCGYVGQLSLGHAMF 81
           SR  I L +L  A AL PL  A  +L+   ++V++FAY+  +WN + G+ GQLSLGH ++
Sbjct: 2   SRQAILLCLLLAAFALAPLA-AGPYLLSVLVVVMYFAYVGQAWNIMMGFAGQLSLGHTLY 60

Query: 82  SGVGGYVSVLLFTTYGLSPWIGMLVGGLVAAALSVFIGYPTFR--LKGPYFALTTIAFAE 139
            G+G Y +  LF   G+   +G+      A  +   +G   FR  +KG YFAL TIAFAE
Sbjct: 61  VGLGAYTAGALFVHLGVPAALGLFAAVAAAVLVGGAVGALGFRFGVKGVYFALLTIAFAE 120

Query: 140 IVRIWVENTDSFLGFRIKGAEGLVVPGVGGDSFWAFQFSGK-VPYYYIILAMLVLAILAT 198
             RI  E+        + G  GL +P             G  + +YY+ILAM V   L  
Sbjct: 121 FTRILFEHIPG-----LGGPGGLFLPVGDRTGIDLIHLRGHPLMFYYLILAMTVGIFLLC 175

Query: 199 MVMERSKLGYCLKAIRGDRDAAEALGISPTRYTQAAFAISAFMTALGGSFYAQFFRYINP 258
             + RS+LGY   A+R D++AA ALGI+  R    A  +SA +TALGG F+A ++  + P
Sbjct: 176 RKLVRSRLGYTWLAVREDQEAAAALGINVFRAKLYAVMLSAGLTALGGVFFAFYYNNLFP 235

Query: 259 ERNMGLELSIDMALMSIIGGQGTPFGPLVGALLLMPLGE---ISRGYLGGQFLGLHLVIY 315
            +  G+  SI++ L  I+GG GT FGP++GAL+L PLGE   ++   LG +  G+  + Y
Sbjct: 236 NQAFGMNRSIEIILAPIVGGLGTLFGPILGALILTPLGEGITMATEALGFKAAGIKQLCY 295

Query: 316 GIVLMITVLYFPKGL 330
           G+ L+  V + P G+
Sbjct: 296 GLSLLAIVKFLPDGV 310