Pairwise Alignments

Query, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 286 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  102 bits (254), Expect = 1e-26
 Identities = 88/335 (26%), Positives = 149/335 (44%), Gaps = 56/335 (16%)

Query: 17  KKTLGLAVSLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGRIAAIHAAE 76
           KK   L  +L  LA A+  G +   +    P ++D  + AD +N+AA V G +  +   +
Sbjct: 2   KKFFSLLSTLLVLALAICIGRTLWVHYMETPWTRDGRVRADIINVAADVTGEVVDVPVRD 61

Query: 77  NGSVRKGELLFALDATTYRLQAEQAAADLKIAEAALADRRRSIAAEQSNAIIAQEQVARA 136
           N  V+KG+LL  +D   YR+  +Q       A++ +A R+ +    + N        A  
Sbjct: 62  NQLVKKGDLLMQIDPEHYRIAVKQ-------AQSLVASRKATWEMRKVN--------AHR 106

Query: 137 RSNLDLASQTLARLEALRPKGYVSAQQVDDAATAKRDAEISLKQALQQQAAADALVSNAA 196
           R++LD                 +S +  DDA+     A    + AL Q            
Sbjct: 107 RADLDAL--------------VISKENRDDASNIADSALADYQHALAQ------------ 140

Query: 197 AAAAVVDARRAALALAERGLADTEVRAPFDGKVVGLDQSPGGFVISGQSLFTLINTDAWF 256
                       L  AE  L  T+V A  DG V  L+   G +   G++   +++ ++++
Sbjct: 141 ------------LEAAELNLKRTQVVAAVDGYVTNLNVHRGDYARIGEAKMAVVDMNSFW 188

Query: 257 ASAAFVETELPGIEVGNCATVYTLADRTRLIRGRVEGIGWGITAQEIINLPFKMPIVPKS 316
               F ET+LP ++VG+ A +  ++  T  ++G VE I  GI  ++       +  V  +
Sbjct: 189 VYGFFEETKLPHVKVGDKADMQLMSGET--LKGHVESISRGIYDRDNPESRELIADVNPT 246

Query: 317 LDWVRVAQRFPVRVRLIDPPAG-LMRVGASATVTV 350
            +WVR+AQR PVR+ + + P G L+  G + TV V
Sbjct: 247 FNWVRLAQRVPVRIHIDEVPEGVLLAAGITCTVIV 281