Pairwise Alignments

Query, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 312 a.a., Tetrapartite efflux system, membrane fusion component FusE-like from Variovorax sp. SCN45

 Score =  102 bits (253), Expect = 2e-26
 Identities = 98/342 (28%), Positives = 147/342 (42%), Gaps = 57/342 (16%)

Query: 10  PSHPRPAKKTLGLAV-SLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGR 68
           PS   P  + LG  + ++  +A AV  G     +  L P ++D  + A+ V IA  V G 
Sbjct: 6   PSSDNPWVQRLGRVLFTVLVVAAAVWAGLRLWDHYELAPWTRDGRVRANVVQIAPDVSGL 65

Query: 69  IAAIHAAENGSVRKGELLFALDATTYRLQAEQAAADLKIAEAALADRRRSIAAEQSNAII 128
           + A+   +N  V  G LLF +D   Y L   QA       +AAL+ +R         A+ 
Sbjct: 66  VTAVPIRDNQPVAAGTLLFEVDRARYDLAVRQA-------QAALSAQR---------AMS 109

Query: 129 AQEQVARARSNLDLASQTLARLEALRPKGYVSAQQVDDAATAKRDAEISLKQALQQQAAA 188
           AQ Q   AR+         A L+ L                +K   E +  +  Q QAA 
Sbjct: 110 AQVQRENARN---------AGLDDL---------------VSKESREQTRSRVEQMQAA- 144

Query: 189 DALVSNAAAAAAVVDARRAALALAERGLADTEVRAPFDGKVVGLDQSPGGFVISGQSLFT 248
                        V     AL  A+  L   EVRAP  G V  LD   G +  +G+ +  
Sbjct: 145 -------------VAQAEVALDSAKLNLQRAEVRAPTSGLVTNLDLRQGSYAAAGRPVLA 191

Query: 249 LINTDAWFASAAFVETELPGIEVGNCATVYTLADRTRLIRGRVEGIGWGITAQEIINLPF 308
           L++  +++    F ET+LP I +G+   V  +     ++ G V+ +  GI   +      
Sbjct: 192 LVDAQSFYVEGYFEETKLPRIHLGDRVRVTPMGGGA-VLEGAVDSVAAGIADHDRSTSAN 250

Query: 309 KMPIVPKSLDWVRVAQRFPVRVRLIDPPAGLMRVGASATVTV 350
            +P V  + +WVR+AQR PVR++L   P G  R+ A  TVTV
Sbjct: 251 LLPSVNPTFNWVRLAQRIPVRIKLDPLPQG-ARLVAGQTVTV 291