Pairwise Alignments

Query, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 365 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 9e-30
 Identities = 105/349 (30%), Positives = 160/349 (45%), Gaps = 32/349 (9%)

Query: 13  PRPAKKTLGLAVSLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGRIAAI 72
           P P+    G+   L  +A ++L+   Y+      P +Q A + A  V +AA V G+I  +
Sbjct: 8   PPPSAPDRGIRWVLLLIAVSLLW---YLLADRYTPYTQQARLQAYVVPVAAEVAGQIKRV 64

Query: 73  HAAENGSVRKGELLFALDATTYRLQAEQAAADLKIAEAALADRRRSIAAEQSNAIIAQEQ 132
               N  VR+G++LF LD   YR+   +A ADL          RR I A  +    AQ  
Sbjct: 65  AVGNNQEVRQGDVLFELDQEQYRIALARAEADLDTV-------RRQIGASTAGIDSAQAA 117

Query: 133 VARARSNLDLASQTLARLEAL--RPKGYVSAQQVDDAATAKRDAEIS--------LKQAL 182
           +  A++N   A Q   RL+ L     G VS +++ + A A RD  IS        +++A 
Sbjct: 118 LVAAQANERKARQDAERLKRLIDEDPGTVSVRRL-EGAQATRDQAISQVAAARAEVERAR 176

Query: 183 QQQAAADALVSNAAAAAAVVDARRAALALAERGLADTEVRAPFDGKVVGLDQSPGGFVIS 242
           +QQ  A     NA   +A  +  +A L LA      T VRA  +G +  L    G +V +
Sbjct: 177 EQQGGAQE--DNAQLRSAAANLEKARLDLAR-----TVVRADANGLITDLRTDVGHYVGA 229

Query: 243 GQSLFTLINTDAWFASAAFVETELPGIEVGNCATVYTLADRTRLIRGRVEGIGWGITAQE 302
           G  + TLI+    + SA   E  L  +       V   A    +++GR+  IG+G++  +
Sbjct: 230 GSPMMTLISIHDVWISADMTENNLGRLRPETPVLVVLDALPGTVLKGRIRSIGYGVSVGQ 289

Query: 303 IINLPFKMPIVPKSLDWVRVAQRFPVRVRLID---PPAGLMRVGASATV 348
               P  +P V  S +W+R AQRFPV + L         ++RVG  A V
Sbjct: 290 -STPPGTLPTVQNSREWLRSAQRFPVIIELERDQLQDKTVLRVGGQAEV 337