Pairwise Alignments

Query, 356 a.a., Multidrug resistance protein MdtN from Xanthobacter sp. DMC5

Subject, 291 a.a., putative efflux pump from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 4e-27
 Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 57/339 (16%)

Query: 19  TLGLAV-SLAALAGAVLFGWSYVRNATLNPLSQDAVITADTVNIAAAVPGRIAAIHAAEN 77
           TLG  V +L  +  A +  W  V      P ++D  I AD + IA  V G I  +   +N
Sbjct: 7   TLGRVVLTLLVVTFAAVLVWQMVVYYMFAPWTRDGHIRADVIQIAPDVSGLIQKVEVRDN 66

Query: 78  GSVRKGELLFALDATTYRLQAEQAAADLKIAEAALADRRRSIAAEQSNAIIAQEQVARAR 137
            +V++G++LF +D   + L   QA       +A L +R+ ++A     A     Q  R  
Sbjct: 67  QTVKRGDVLFTIDQDRFTLALRQA-------KATLGERQETLAQASREA-----QRNRKL 114

Query: 138 SNLDLASQTLARLEALRPKGYVSAQQVDDAATAKRDAEISLKQALQQQAAADALVSNAAA 197
            NL                  V+A+Q++++                         S  A 
Sbjct: 115 GNL------------------VAAEQLEESQ------------------------SREAR 132

Query: 198 AAAVVDARRAALALAERGLADTEVRAPFDGKVVGLDQSPGGFVISGQSLFTLINTDAWFA 257
           A + V   + A+  A+  L  + VR+P DG +         FV +G+ + +++++ ++  
Sbjct: 133 ARSAVSEAQVAVDTAQLNLDRSVVRSPVDGYLNDRAPRNHEFVTAGRPVLSVVDSASYHV 192

Query: 258 SAAFVETELPGIEVGNCATVYTLADRTRLIRGRVEGIGWGITAQEIINLPFKMPIVPKSL 317
              F ET+L GI +G+   +  + D TRL RG V+    GI  ++  +    +P V  + 
Sbjct: 193 DGYFEETKLGGIHIGDAVDIRVMGDNTRL-RGHVQSFAAGIEDRDRSSGANLLPNVNPAF 251

Query: 318 DWVRVAQRFPVRVRLIDPPAGL-MRVGASATVTVHHGTR 355
            WVR+AQR PVR+   + P    M  G +ATV++  G R
Sbjct: 252 SWVRLAQRIPVRIAFDEVPQDFRMIAGRTATVSIIEGQR 290