Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 819 a.a., ATP-dependent DNA ligase from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 8e-12
 Identities = 78/289 (26%), Positives = 116/289 (40%), Gaps = 45/289 (15%)

Query: 188 RGPRPETSNPAPFRPVMLAHAIEEADFTTLDPAAFSAEWKWDGIRVQAVAGTGPDGVRVV 247
           R    +T+ P  F P  LA  ++ A         +  E K+DG R+ A    G      V
Sbjct: 194 RAKARKTALPEQFTP-QLATLVDRAP-----EGDWQYEIKFDGYRMLARIQAGE-----V 242

Query: 248 RLYSRTGEDISDAFPDMAEAITF----DGAMDGELLIVRDGRVEPFNVLQQR--LNRKTV 301
           RL++R G D ++  P   +A+      D  +DGE++ +    +  F  LQ    + R   
Sbjct: 243 RLFTRNGHDWTECLPRQVKALQALKLKDSWLDGEVVSLNGDGLPDFQALQNAFDIGRSLD 302

Query: 302 TVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLEALVARLQTPRIDLSPMVPFSTW 361
            V  L + P         ++G +D R+ P   RRA L+  +A  ++  +  S        
Sbjct: 303 IVYYLFDAP--------FLNG-EDRRQAPVEERRAALKEALAGSRSTLLRYS-------- 345

Query: 362 EDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRPKGPWWKWKRDPHTVDAVLMYA 421
           E  TA  RD   +       A+EGV+ KR  SPY+  R    W K K        ++ Y 
Sbjct: 346 EAFTAHHRDIFESACDL---ALEGVIGKRLGSPYV-SRRSADWIKLKCRLSQEFVIVGYT 401

Query: 422 QRGHGKRSSFYSDYTFGVWTQSEEGEDVLVPVGKAYFGFTDEELKQIDA 470
            R  G RS       FG    +   +  LV  G+   GF    LK I A
Sbjct: 402 -RPQGSRSG------FGALLLAVNNDTGLVYAGRVGTGFDQAALKAIYA 443