Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 833 a.a., DNA ligase D from Pseudomonas putida KT2440

 Score = 46.2 bits (108), Expect = 5e-09
 Identities = 81/312 (25%), Positives = 117/312 (37%), Gaps = 48/312 (15%)

Query: 211 EADFTTLDPAAFSAEW----KWDGIRVQAVAGTGPDGVRVVRLYSRTGEDISDAFPDMAE 266
           +    TL  +  S +W    K+DG R+ A    G D    +RL++R G D S   P    
Sbjct: 218 QPQLATLVDSPPSGDWRYEVKFDGYRILARI-EGQD----IRLFTRNGHDWSSKMPRQVA 272

Query: 267 AITFDGA----MDGELLIVRDGRVEPFNVLQQRLNRKTVTVKMLAEFPAHIRAY--DLLV 320
           A+   G     +DGE+++  +  +  F  LQ   +          E    I  Y  DL  
Sbjct: 273 ALRALGIDSAWLDGEMVVADENGMADFQALQNAFD---------TEHDERITYYLFDLPF 323

Query: 321 DGTDDLREQPFAARRARLEALVARLQTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADA 380
            G  DLR+ P   RR  L  L+       I  S     + +++   +  D A        
Sbjct: 324 LGGQDLRQLPLQNRRNTLRQLLEHNHCDVIKYS-----ADFDEPVQSLLDSAC------R 372

Query: 381 GAVEGVMIKRADSPYLPGRPKGPWWKWKRDPHTVDAVLMYAQRGHGKRSSFYSDYTFGVW 440
             +EG++ KR DS Y  GR    W K K        ++ Y     G RS F +       
Sbjct: 373 LKLEGLIGKRVDSVY-SGRRSPDWIKLKCKQRQEFVIVGYTD-PKGSRSGFGA--LLLAL 428

Query: 441 TQSEEGEDVLVPVGKAYFGFTDEELKQIDAFVRRATINR-------FGPVREVVHEKDEG 493
             ++ G+  L   GK   GF    L  I A ++   I R        G     VH     
Sbjct: 429 HDNDSGQ--LRYAGKVGTGFNATTLASIHARLKPLEIARPALPSPPAGAEARGVHWLRPQ 486

Query: 494 LVLEVAFEGLAR 505
           L+ EVAF  + R
Sbjct: 487 LLAEVAFAQMTR 498