Pairwise Alignments

Query, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

Subject, 345 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score = 53.1 bits (126), Expect = 2e-11
 Identities = 60/188 (31%), Positives = 81/188 (43%), Gaps = 25/188 (13%)

Query: 225 EWKWDGIRVQAVAGTGPDGVRVVRLYSRTGEDISDAFPDMAEAITFDGA----MDGELLI 280
           E KWDG R+       P GVR++   +R G D +  FP +A A    G     +DGE ++
Sbjct: 60  EIKWDGYRL--AVHIEPKGVRII---TRGGHDWTHRFPTIAAAAKRLGIGTAILDGEAVV 114

Query: 281 VRDGRVEPFNVLQQRLNRKTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLEA 340
           +       F  LQ+ L  +       A   + + A+DLL     DL +   + RR  L  
Sbjct: 115 LNSEGRSDFGALQRSLGGRG---GKRASSESILFAFDLLYFDGHDLTKTELSVRRHLLTD 171

Query: 341 LVARLQTPRIDLSPMVPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGRP 400
           L+       I LS  V     E L  AR    S G       +EG++ K  DSPY PGR 
Sbjct: 172 LLDGA-VGAIQLSEEVAGEGAELLENAR----SLG-------LEGIIAKHRDSPYRPGR- 218

Query: 401 KGPWWKWK 408
            G W K K
Sbjct: 219 TGDWLKIK 226