Pairwise Alignments

Query, 1021 a.a., Multidrug export protein AcrF from Xanthobacter sp. DMC5

Subject, 1040 a.a., AcrB/AcrD/AcrF family protein from Ralstonia solanacearum PSI07

 Score =  743 bits (1918), Expect = 0.0
 Identities = 419/1025 (40%), Positives = 611/1025 (59%), Gaps = 15/1025 (1%)

Query: 4    FNLSDWALEHRSLVWYFMLAFVLAGFMSYLQLGREEDPAFTIKTMVIQAQWPGASAQEMT 63
            FNLS  A+  R++  + +    LAG +S+ +LGR EDPAFT+K M I   WPGA+AQEM 
Sbjct: 6    FNLSALAVRERAVTLFLICLISLAGLISFFKLGRAEDPAFTVKVMNIVTVWPGATAQEMQ 65

Query: 64   RQVTDRIEKKLEELEALDYTRSLTVPGQTTIFVNLRDTTKARDVVPTWLQVRNMVNDIRG 123
             QV ++IEK+++EL   D T + T PG     + L D+T   +V   + Q R  V+D   
Sbjct: 66   DQVAEKIEKRMQELRWYDRTETYTRPGLAFTTLTLLDSTPPSEVQEEFYQARKKVSDEVV 125

Query: 124  TFPQGVTGPQFNDRFGDVYGNIYAFTSDGLTQRQLRDRVEEVRAQVLTVPNVGRVDIIGA 183
              P GV GP  ND + DV   ++A  + G  QR L    E +R ++L VP V +V+IIG 
Sbjct: 126  NLPSGVIGPIVNDEYSDVTFALFALKAQGEPQRVLVRDAETLRQRLLHVPGVKKVNIIGE 185

Query: 184  QDEVIFLEFSTRKMAALDIDQRAVLSSLQAQNALVPSGVLQAGPERIAVRVNGRFSSEES 243
            Q E I++EFS  ++A L +  + V ++L +QNAL  +G ++    ++ +R++G F   + 
Sbjct: 186  QSERIYVEFSHDRLATLGVSPQEVFAALNSQNALTAAGSVETKGPQVFIRLDGAFDELQK 245

Query: 244  LKAINLRINGRFFPLTDIATIRRGYVDPPQSLFRFNGEPAIGLAIGMKAGANLLQFGEAL 303
            ++   +   GR   L+DIAT++RGY DP   + R  G+PA+ L I M+ G N L  G+AL
Sbjct: 246  IRDTPVVSQGRTLKLSDIATVKRGYEDPATFMVRNGGQPALLLGIVMRDGWNGLDLGKAL 305

Query: 304  KAEMTRIEADLPVGVGVHLVSDQPQIVEEAVGGFTRALMEAVIIVLAISFVSLGLRAGLV 363
              E+  I AD+P+G+ +  V+DQ   +  AV  F      A+++V+ +SFVS+G RAGLV
Sbjct: 306  DKEVGAINADMPLGMSLTKVTDQAVNISAAVDEFMLKFFAALLVVMLVSFVSMGWRAGLV 365

Query: 364  VAISIPLVLAITFMVMAYTGISLQRISLGALIIALGLLVDDAMIAVEMMVARLEAGDTLR 423
            VA ++PL LA+ F+VMA TG +  RI+LG+LI+ALGLLVDDA+IA+EMMV ++E G +  
Sbjct: 366  VAAAVPLTLAVVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSRV 425

Query: 424  KAATYVYTSTAFPMLSGTLVTVAGFIPIGLNNSNAGEFTFTLFVVIAVSLLVSWLVAVLF 483
             A+ Y ++ TA PMLSGTLVT  GF+P G   S AGE+T  +F ++ ++L+ SW+VAV+F
Sbjct: 426  AASAYAWSHTAAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALIASWVVAVVF 485

Query: 484  TPLLGVAILPKSLPHHKEGGGRFA-------RAFAWILKRAMLWRWTTIGVTVLVFILSL 536
            TP LGV +LP      K  GG  A         F  +L R +  +W   G  V +F L++
Sbjct: 486  TPYLGVKMLP---DFKKVEGGHDAIYDTPRYNRFRALLGRVIARKWLVAGAVVSLFALAI 542

Query: 537  AGMGLVQQQFFPSSDRRELIVDWNLPQNASIAETNAQMARFEQEVLKGNPDIDHWSTYVG 596
            AGM +V++QFFP SDR E++++  +P   SI +T+A  A+ E  + K   +    + Y+G
Sbjct: 543  AGMAVVKKQFFPISDRPEVLIELQMPYGTSINQTDAATAKLEAWLAK-QKEAKIVTAYIG 601

Query: 597  TGAPRFVLPVDVQPADVAFGQTIIVTKGLEERNRLKGQF-QAYLDKAMPGTDAFVHFLDI 655
             GAPRF L +  +  D +F + +I T   EER+ LK +  QA  D   P     V  L  
Sbjct: 602  QGAPRFYLAMGPELPDPSFAKIVIRTDSQEERDALKQRLRQAIADGLAPEARVRVTQLVF 661

Query: 656  GPPVGRPVQYRVSGPDIQQVRTYALDFASVMRGNPHLGNVVFDWMEPARVIKVDVLQDKA 715
            GP    PV YRV+GPD Q +R  A D   VM  +P +     DW      +   + QD+ 
Sbjct: 662  GPYSPFPVAYRVTGPDAQTLRRIAADVQQVMDASPMMRTANTDWGMRVPTLHFTLQQDRL 721

Query: 716  RQLGVTSEDIAGALNGVLDGTAITQVRDDIYLVTVLGRANAQERQSIETLRDLQLPGSGG 775
            + +G+TS  +A  L  +L+G  +T VR+DI  V V  R+    R     + D  L G+ G
Sbjct: 722  QAVGLTSSAVAQQLQFLLNGIPVTAVREDIRTVQVTARSAGSVRLDPAKIGDFTLAGANG 781

Query: 776  RSVPLAAVATLRYEIEQPTIWRRSRLPTITAKAGIIDTAQPNTVVEQLTPAVAAFNAKLP 835
            + +PL+ V  +   +E+P I RR R+PTIT +  I D  QP  V   ++  +     KLP
Sbjct: 782  QRIPLSQVGKIDVRMEEPIIRRRDRMPTITVRGDIADGLQPPDVSTAISKQLQPIIEKLP 841

Query: 836  PGYRVVIGGAVEESQKSQAPILAVMPLMLFIMATILMIQLQSFQRLVLVFAVAPLALIGV 895
             GYR+   G++EES K+   +L + P+ML +   IL+ Q++S   +V+VF  +PL LIGV
Sbjct: 842  SGYRIEQAGSIEESGKATKAMLPLFPIMLAVTLLILIFQVRSIPAMVMVFLTSPLGLIGV 901

Query: 896  VAALVPSGAPLGFVAILGVLALIGILIRNSVILIVQIEQLRAEGRPPWDAVREATEHRMR 955
            V  L+  G P G  A++G++AL GIL+RN++ILI QI+  + EG  P+ AV EAT  R R
Sbjct: 902  VPTLILFGQPFGINALVGLIALSGILMRNTLILIGQIQHNKDEGLDPFRAVVEATVQRAR 961

Query: 956  PIMLTAAAASLGLIPIAREVFWGPMAYAMMGGIIVGTVLTLLFLPALYVAWFRIPAPKPG 1015
            P++LTA AA L  IP+   VFWG +AY ++GG   GT+LTL+FLPA+Y  WFRI   +PG
Sbjct: 962  PVILTALAAILAFIPLTHSVFWGALAYTLIGGTFAGTILTLVFLPAMYSIWFRI---RPG 1018

Query: 1016 DGAQA 1020
            + A A
Sbjct: 1019 NAADA 1023