Pairwise Alignments

Query, 358 a.a., Multidrug resistance protein MdtE from Xanthobacter sp. DMC5

Subject, 438 a.a., Efflux pump periplasmic linker BepF from Xanthobacter sp. DMC5

 Score = 95.9 bits (237), Expect = 2e-24
 Identities = 102/364 (28%), Positives = 148/364 (40%), Gaps = 25/364 (6%)

Query: 10  LASAAALAGCSEQAAAPAVPPRPVLTAVV--QPMSRDVLEVAGTIEPQVQTDLSFRVLGR 67
           L +A  L+ C E+      PP  V  A V  QP++R  LE+ G        DL+ RV G 
Sbjct: 18  LGAAFLLSACEEKNTYVPPPPPKVTVATVLEQPITR-FLELTGNTAAINSVDLNARVQGF 76

Query: 68  LLARSVNVGDVVTKDQVVAAIDDTALKLAVRSALAEVANAQAQLTNASGTEDRQRTLLET 127
           L   +   G    K   +  I+       V  A A +A  QA    A    +RQ  L + 
Sbjct: 77  LTNINYKDGAFAKKGTTLFVIEQDTYIAQVDQAKATLAANQASQVQAEAEFNRQNQLAKQ 136

Query: 128 AATSRATFETAEQGRAAAEASLARAQANLVKAREQLGYAQLKAEFAGVVTAVGAELGQVV 187
              S+A  + A   R +A A +A A+A+L  A+  LGY Q+ A F G VTA   ++G +V
Sbjct: 137 DFASQAALDQARAKRDSAVAQVANAEASLQLAQINLGYTQVNAPFDGAVTAHLQDVGALV 196

Query: 188 --SPGRSVVTIARPD---------------VREAVVDIGEDFIGDIR--IGSPFQLSLQL 228
             S    + TI + +               ++E +   G       R     P ++ LQ 
Sbjct: 197 GYSGPTKLATIVQLNPIWVWFTLSEQEVLRIKEQLAKQGRSLTSLTRDLPDIPIEIGLQT 256

Query: 229 DGAPVATGRVREIAPQADSVTRTRRVRITLDNPPEAFRLGATVAAR-PAGNLASDLFIPG 287
           +      GR+  IAPQ D    T  VR    N       G     R P G  A  + +P 
Sbjct: 257 ETGYPHAGRIDYIAPQVDPNLGTLTVRGIFQNDDFVLLPGLFARVRVPLGQPAPTILVPD 316

Query: 288 SAVFTRDGKSFVWRVTAEDRTVHAQEITASAASGDKAR-VTAGLEAGTRLVTAGVHSLSE 346
           SAV       +V  V++ D  V   +IT      D  R V +GL+   R++  G+     
Sbjct: 317 SAVSYNQLGPYVLTVSS-DNVVGQTQITLGQLQADGLRAVLSGLKTTDRVIINGMQRAVP 375

Query: 347 GQKV 350
           G K+
Sbjct: 376 GSKI 379