Pairwise Alignments

Query, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

Subject, 325 a.a., xylitol ABC transporter, permease component (from data) from Pseudomonas simiae WCS417

 Score =  207 bits (528), Expect = 2e-58
 Identities = 114/294 (38%), Positives = 175/294 (59%), Gaps = 4/294 (1%)

Query: 32  LLCVALSVATDAFFTTNNILNVLRQASLLFFLASGLTLVILTGGLDLSVGANIGLSACLA 91
           LLCV ++ +++ F T  N +++LRQ S+   LA G+T VILT G+DLSVG+ +  +   +
Sbjct: 33  LLCVVMAFSSEYFMTWRNWMDILRQTSINGILAVGMTYVILTKGIDLSVGSILAFAGLCS 92

Query: 92  ATVIKATGSPALGTLTGLATGCAIGVCNGLMVAKLRIPSFIATYGMLWVLHGLTYYYMAG 151
           A V             G+  G  +GV NG MVA L IP F+AT GML +  G+T+    G
Sbjct: 93  AMVATQGYGLLAAVSAGMFAGAMLGVVNGFMVANLSIPPFVATLGMLSIARGMTFILNDG 152

Query: 152 ETIHGFPPGFRQIGSGYF--LGIPIPVYLMIGFLIAGSVFAQRTVWGQQIYAIGANPVAA 209
             I   P  +  +G G    +G+PI ++ ++  +    +  + T +G+ +YA+G N  +A
Sbjct: 153 SPITDLPDAYLALGIGKIGPIGVPIIIFAVVALIF--WMVLRYTTYGRYVYAVGGNEKSA 210

Query: 210 RLTGIPVDRRLILVYAFSGAMAGVASIVFLARLNSAEGDIGEAMTLPAIAAVLIGGASLF 269
           R +GI V + +  VY  SG +AG+A +V  AR  SA    G +  L AIAAV+IGG SL 
Sbjct: 211 RTSGIGVRKVMFSVYVVSGLLAGLAGVVLSARTTSALPQAGVSYELDAIAAVVIGGTSLS 270

Query: 270 GGVGSVFGTFVGALILTLVLNGMNLLAVNSSWQPLVTGVIVIFAVWLDMIGRKR 323
           GG GS+ GT  GAL++ ++ NG+NLL V+S +Q +  G+I++FAV +D+  +K+
Sbjct: 271 GGTGSIVGTLFGALLIGVINNGLNLLGVSSYYQQVAKGLIIVFAVLIDVWRKKK 324