Pairwise Alignments

Query, 324 a.a., Ribose import permease protein RbsC from Xanthobacter sp. DMC5

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  214 bits (545), Expect = 2e-60
 Identities = 115/323 (35%), Positives = 182/323 (56%), Gaps = 17/323 (5%)

Query: 18  KDMQQLIYRLLAAGLLCVALSVATDAFFTTNNILNVLRQASLLFFLASGLTLVILTGGLD 77
           KD+ Q    L +   L    S  ++AFFT NN + +  Q + +  L  G T VI+TGG+D
Sbjct: 18  KDIIQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGID 77

Query: 78  LSVGANIGLSACLAATVIKATGSPA-LGTLTGLATGCAIGVCNGLMVAKLRIPSFIATYG 136
           LSVG+ + L+  +AA  +K  G P  +G L G+ TG   G+ NGL+V + ++P FIAT G
Sbjct: 78  LSVGSVLALAGVVAALAVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIATLG 137

Query: 137 MLWVLHGLTYYYMAGETIHGFPPGFRQIGSG----------------YFLGIPIPVYLMI 180
           M+ +  G+         + G    F ++G+G                 F GIP PV LM+
Sbjct: 138 MMLIARGVALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVILMV 197

Query: 181 GFLIAGSVFAQRTVWGQQIYAIGANPVAARLTGIPVDRRLILVYAFSGAMAGVASIVFLA 240
              +A S    R++ G+ IYA+G+N  AARL+G+ V R     Y  SG +AG+   V ++
Sbjct: 198 VIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVLMS 257

Query: 241 RLNSAEGDIGEAMTLPAIAAVLIGGASLFGGVGSVFGTFVGALILTLVLNGMNLLAVNSS 300
           RL +A+ + G    L AIA+ +IGG SL GGVG++ GT +GA ++ ++ NG+N+  V++ 
Sbjct: 258 RLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRNGLNMNGVSAF 317

Query: 301 WQPLVTGVIVIFAVWLDMIGRKR 323
            Q ++ G++++  VW+D +  +R
Sbjct: 318 TQQIIIGLVILVTVWIDQLRNRR 340