Pairwise Alignments

Query, 388 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

 Score =  176 bits (446), Expect = 1e-48
 Identities = 121/357 (33%), Positives = 174/357 (48%), Gaps = 4/357 (1%)

Query: 16  GALAWQQGLIGAAAQASKPKAPPPPIPVIATAVKTEDVPVYGEGIGTVQASNTITVKVRV 75
           GALA    L G    A +  A     PV    +  E V +  E  G V+      V+ RV
Sbjct: 11  GALAMAIALAGCEPAAEQDGAANASYPVEIVTLAPEQVALAAELPGRVEPMRVAEVRARV 70

Query: 76  DGELTKVVFKEGQEVKAGDILAQIDQRPFAAALAQAKAARAKDEALLANAKADYDRYKVL 135
            G +    F+EG +VKAGD+L QID  PF AALA+A+A  A+ +A+   A+A   RY+ L
Sbjct: 71  PGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPL 130

Query: 136 VPKQAASQQQLDTQSALVAQYQAQISGDEAAIDNAQIQLDYTTIRAPISGRTGVRLVDEG 195
           V  +A SQQ  D+ +A +    A +   +A +  A++ L Y T+ APISGR G  L  EG
Sbjct: 131 VKIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEG 190

Query: 196 NIVHANDGGGLVVITQLKPVAVVFTLPQDRLDDMQAALARGPVSA----LAFRRDGVTEV 251
            +V   +   +  I QL P+ + FT        ++ AL  G +SA    L  + +G    
Sbjct: 191 ALVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGALSADSQRLTAQVEGTDFQ 250

Query: 252 GEGTVALIDNQISSDTGTLRIKAVFPNDDLKLWPGAFVNVKVLLDTHHNVITIPAQAIQR 311
             G +   D  +   TG + ++  F N D  L PG +V V+    T ++ I +P +A+QR
Sbjct: 251 RSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRAVQR 310

Query: 312 GPDGFYVYVVKPDATVEKRAVTTSGISAGIASIATGLVAGDQVVIDGQYKLIPGARV 368
           G DG    +V  +   E RAV T  +      I  GL  GDQV++     L PG  V
Sbjct: 311 GSDGQARVLVATNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPGMPV 367