Pairwise Alignments

Query, 602 a.a., putative ABC transporter ATP-binding/permease protein from Xanthobacter sp. DMC5

Subject, 602 a.a., Lipid A export ATP-binding/permease protein MsbA from Pseudomonas putida KT2440

 Score =  187 bits (474), Expect = 1e-51
 Identities = 142/488 (29%), Positives = 230/488 (47%), Gaps = 17/488 (3%)

Query: 85  EATLKFVAELRPWFFARLIPLAPAALEDQRSGDLLARLKGDIDRLEFAFLRILSPGLAAV 144
           + +L  V +LR   F +L+ L     ++  SG L++R+  ++  +  A    +       
Sbjct: 106 KVSLSLVHDLRVALFNKLLVLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIK------ 159

Query: 145 LVLAVGLTVLALHDGGMAVGIGLAALLAGLGLPLLVHRLGA------RVAREVTAGTAQL 198
           +V+  GLTV+ L    + +   L  ++  + LP++   +        + ++++      +
Sbjct: 160 VVIREGLTVVFLFAYLLWMNWHLTLVMVAI-LPVIAVMVSIASKKFRKQSKKIQVAMGDV 218

Query: 199 NALLVDHLEGRAELDIYDPDRRHRAALDETSDTLIAREHRLAGILGFAGAGVGLFAQSSL 258
             +  + ++G   +  +  +   +    + S +   ++ R+          + L   S++
Sbjct: 219 THVASETIQGYRVVRSFGGEAYEQQRFGQASQSNTDKQLRMTKTGSLYTPMLQLVIYSAM 278

Query: 259 VLVLLIGAPRVLAGTLPGADLPMLALLALSLFEAVAPLPLAFQTLPATLASARRIFDLLD 318
             ++ +     L G     DL      A  L + +  L     T+   LA A  IF+ LD
Sbjct: 279 AALMFLVL--FLRGDSTAGDLVAYITAAGLLPKPIRQLSEVSSTIQKGLAGAESIFEQLD 336

Query: 319 RPPPVEEPAAPKPVPETGTLAFAHAGLTYPGASGPALTDIDLALAPGRRIGVVGSSGSGK 378
             P V+     K   E G L   +   TYPG     L+DI     PG+ I +VG SGSGK
Sbjct: 337 EAPEVDTGTVEKERVE-GRLEVRNLSFTYPGTEREVLSDISFVAEPGQMIALVGRSGSGK 395

Query: 379 SSLVALALRFRAPAPGEVTFAGSSIADFNSDDLRRRMAVLAQHDHLFAATIRENLLVADP 438
           S+L AL  RF     G++   G  I  +   +LRR ++ + QH  LF  T+  N+   D 
Sbjct: 396 STLAALIPRFYHHDKGQILLDGVEIEHYRLRNLRRHVSQVTQHVTLFNDTVANNIAYGDL 455

Query: 439 DASPEK-LEAALERAGVLAFVAAQPEGLDTFLGANGAKVSGGQARRLGLARALLKEAPLL 497
             +P   +EAA   A    FV   P+G DT +G NG  +SGGQ +RL +ARALLK APLL
Sbjct: 456 AGAPRADIEAAAADAYAKEFVDRLPKGFDTEVGENGVLLSGGQRQRLAIARALLKNAPLL 515

Query: 498 ILDEPTEGLDGETERDVLEGVLGVARDQALLFITHRRAGLEAMDEIIVMDGGRIVARGAP 557
           ILDE T  LD E+ER +   +  V + +  L I HR + +E  D+I+VMD GR+V RG  
Sbjct: 516 ILDEATSALDTESERHIQAALDHVMQGRTTLVIAHRLSTIEKADQILVMDQGRLVERGTH 575

Query: 558 ADMLAIVG 565
            ++LA  G
Sbjct: 576 TELLAANG 583