Pairwise Alignments

Query, 266 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

 Score =  213 bits (542), Expect = 4e-60
 Identities = 111/250 (44%), Positives = 159/250 (63%), Gaps = 1/250 (0%)

Query: 6   PLLDVSGIGISFGGLKAVDAVSFKVGAGEVFSIIGPNGAGKTTLFNLVTGIYRPSRGSVR 65
           PLL++ GI +SF G+KA+  + F V  GE+ ++IGPNGAGK++L N++ G+YR  +G +R
Sbjct: 5   PLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQGRIR 64

Query: 66  LDGADITTVPPHRRVSRGMARTFQNLQIFFRMTAVENVMVGCALSERTSFLADMLGLPSV 125
             G     + PH     G+ARTFQN+ +F  M+ ++NV+ G  L  R+S+L   L +   
Sbjct: 65  FAGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLKRRSSWLEQALRIGRA 124

Query: 126 FRQNRVTREKALALLDRVGLAALADAPAGALPYGALKRLEIARALAADPKILLLDEPAAG 185
             ++   R  A  +++ + +    D   G LPYG  KR+E+ARALAA+P++LLLDEP AG
Sbjct: 125 PGEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLLLDEPMAG 184

Query: 186 CNAVETEAIDHLIAEIAKG-GIAVVLIEHDMKLVMKISDRVLVLAQGRPLAEGPPRAVRE 244
            NA E   +   I EI +  G+ VVLIEHD+ +VM IS  V+VL  GR + +G P  VR 
Sbjct: 185 MNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDGSPEQVRR 244

Query: 245 NPEVIAAYLG 254
           NP+VIAAYLG
Sbjct: 245 NPDVIAAYLG 254