Pairwise Alignments

Query, 266 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  199 bits (506), Expect = 6e-56
 Identities = 110/257 (42%), Positives = 167/257 (64%), Gaps = 9/257 (3%)

Query: 7   LLDVSGIGISFGGLKAVDAVSFKVGAGEVFSIIGPNGAGKTTLFNLVTGIYRPSRGSVRL 66
           +L V  + + FGGL A++  SF+   GE+ ++IGPNGAGKTT+FN +TG Y+P+ G + +
Sbjct: 21  ILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPTMGMITM 80

Query: 67  DGAD-----ITTVPPHRRVSRG-MARTFQNLQIFFRMTAVENVMVGC--ALSERTSF-LA 117
              +     +  +P      +  +ARTFQN+++F  +T +EN++V    AL + + + + 
Sbjct: 81  RQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKASGYTIL 140

Query: 118 DMLGLPSVFRQNRVTREKALALLDRVGLAALADAPAGALPYGALKRLEIARALAADPKIL 177
            +LGLP+  R    + EKA   L++  L   AD PAG LPYGA +RLEIARA+   P++L
Sbjct: 141 GLLGLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAMCTGPELL 200

Query: 178 LLDEPAAGCNAVETEAIDHLIAEIAKGGIAVVLIEHDMKLVMKISDRVLVLAQGRPLAEG 237
            LDEPAAG N  E+ A++ L+  I   G +++LIEHDM +VM+ISD V+VL  G+ +++G
Sbjct: 201 CLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEYGQKISDG 260

Query: 238 PPRAVRENPEVIAAYLG 254
            P  V+ +P+VIAAYLG
Sbjct: 261 SPDHVKNDPKVIAAYLG 277