Pairwise Alignments

Query, 314 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  181 bits (460), Expect = 2e-50
 Identities = 108/329 (32%), Positives = 172/329 (52%), Gaps = 22/329 (6%)

Query: 6   RSRLTPLIALALIMALVPMIAPTSFHLRVAALVWIFSLAALGLTILMGYAGQVSLGHAGF 65
           +SRL  +I   +++A+V  I    + L V  L  I+ L  LGL I++G AG + LG+  F
Sbjct: 102 KSRLRYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAF 161

Query: 66  LGIGAYAVAIGPAHLGLDPLLCLLLGAVLSGLIAWLVGRPILKLKGYYLAIATLGFGVIV 125
             IGAY +A+G  +LGL     L L A+ + L   ++G P+L++ G YLAI TLGFG I+
Sbjct: 162 YAIGAYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEII 221

Query: 126 ALILYSETELTGGPDGMSVSRIT-------------------LFGWRVTGALNWYWVSAG 166
            L+L +    TGGP+GM     T                    FG+    +L + ++ A 
Sbjct: 222 RLVLNNWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAV 281

Query: 167 ALLIGALIAL---NIAASPTGRALRALHDSEVAAAGAGIDVSAKKLAAFVVAAVYAAVAG 223
             ++   +      +   P GRA  AL + E+A    G++    KL+AF + A  A +AG
Sbjct: 282 LFMVVLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAG 341

Query: 224 GLLAAMNGLITPEAASFSHSVELVAMVIIGGLGSVFGTVLGAAFLVVLPQTLTAFQEYEQ 283
              A   G + P + +F  S  ++A+V++GG+GS  G V+ A  L V P+ L +F EY  
Sbjct: 342 VFFATYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRV 401

Query: 284 AVLGLLIMVFMIFLPQGIVPSLRAMIEER 312
            + G+L+++ MI+ P+G++   R  +  R
Sbjct: 402 LLFGVLMVLMMIWRPRGLIRISRTGVTPR 430