Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  157 bits (398), Expect = 2e-43
 Identities = 97/305 (31%), Positives = 174/305 (57%), Gaps = 23/305 (7%)

Query: 4   FLQLAFSGLTVGAIYALIALGFTLIYNASDVINFAQGDFVMIGGMGTVFLMAAGLAL--- 60
           FLQ   +GLT+G++Y LIA+G+T++Y    +INFA G+  MI    + +L A  LAL   
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMI----SAYLAAISLALLAY 60

Query: 61  ------PVAALLAVVAAVLV----GLLLHRLAIEPARGASPVTLIMITIGASIFIKGVSQ 110
                 P+  L  ++  V+V    G ++ R+A +P R ++ +  ++  IG S+ ++  +Q
Sbjct: 61  FGIESFPLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQ 120

Query: 111 IIFDKQFHSLPAF-SGDTPIPVGGATI--LPQSLWVMGTALALVVALYLFLEHTLVGKAV 167
           I    +   +P   +G   + +G   +      ++++  A A +  L   +++T +G+  
Sbjct: 121 IAQGAKQQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMC 180

Query: 168 LATAANRLAAKLVGINVALVLALAFGLSAAMGALAGVVATPITLTRYDI--GTLFTLKGF 225
            AT  +R  A ++GIN   V++  F + AAM ALAGV+ T +    +D   G +  +K F
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAAMAALAGVLIT-LNYGTFDFYAGFIIGIKAF 239

Query: 226 AAAMLGGMGNPVGAVVGGLLIGLIETFAAGYLSSTYKDAVAFLMILVVLLFMPRGLFGSR 285
            AA+LGG+G+  GA++GG+++G+ E+  +G ++S YKD  +F +++V+L+F P+GL G  
Sbjct: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRP 299

Query: 286 TVERV 290
            V +V
Sbjct: 300 LVAKV 304