Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  151 bits (382), Expect = 2e-41
 Identities = 93/305 (30%), Positives = 166/305 (54%), Gaps = 23/305 (7%)

Query: 4   FLQLAFSGLTVGAIYALIALGFTLIYNASDVINFAQGDFVMIGGMGTVFLMAAGLALPV- 62
           FLQ   +GLT+G++Y LIA+G+T++Y    +INFA G+  MI    + +L A  LAL   
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMI----SAYLAAISLALLAY 60

Query: 63  ------------AALLAVVAAVLVGLLLHRLAIEPARGASPVTLIMITIGASIFIKGVSQ 110
                         L  +V   + G  + R+A +P R ++ +  ++  IG S+ ++  +Q
Sbjct: 61  FGVESFPLLMLGTLLFTIVVTGVYGFTIERIAYKPLRNSTRLAPLISAIGISLILQNYAQ 120

Query: 111 IIFDKQFHSLPAF-SGDTPIPVGGATI--LPQSLWVMGTALALVVALYLFLEHTLVGKAV 167
           I    +   +P    G   + VG   +      ++++  A   +  L   +++T +G+  
Sbjct: 121 ISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMC 180

Query: 168 LATAANRLAAKLVGINVALVLALAFGLSAAMGALAGVVATPITLTRYDI--GTLFTLKGF 225
            AT  +R  A ++GIN   V++  F + A M ALAGV+ T +    +D   G +  +K F
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLIT-MNYGTFDFYAGFIIGIKAF 239

Query: 226 AAAMLGGMGNPVGAVVGGLLIGLIETFAAGYLSSTYKDAVAFLMILVVLLFMPRGLFGSR 285
            AA+LGG+G+  GA++GG+++G+ E+  +G ++S YKD  +F +++++L+F P+GL G  
Sbjct: 240 TAAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLGRP 299

Query: 286 TVERV 290
            V +V
Sbjct: 300 LVAKV 304