Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 293 a.a., putative Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 1e-47
 Identities = 100/294 (34%), Positives = 159/294 (54%), Gaps = 5/294 (1%)

Query: 1   MSEFLQLAFSGLTVGAIYALIALGFTLIYNASDVINFAQGDFVMIGGMGTVFLMAAGLAL 60
           M+ F ++   GL  G +Y+L+A+GF LIY AS V NFAQG  V+   +  V L+  G+  
Sbjct: 1   MAFFFEVLIGGLLAGVMYSLVAIGFVLIYKASGVFNFAQGAMVLFAALTFVSLLERGVPF 60

Query: 61  PVAALLAVVAAVLVGLLLHRLAIEPARGASPVTLIMITIGASIFIKGVSQIIFDKQFHSL 120
            ++ L+ +   + + LL+ R  + P  G SP+TL M T+G +  I+G +Q ++  Q H L
Sbjct: 61  WLSFLVTLATMIALALLIERAVLRPLVGRSPITLFMATLGLAYIIEGAAQALWGAQVHGL 120

Query: 121 PAFSGDTPIPVGGATILPQSLWVMGTALALVVALYLFLEHTLVGKAVLATAANRLAAKLV 180
                D P+ +GG  +    L+   TA ALVV L L    T +G A+ A A +  AA  V
Sbjct: 121 ELAISDAPLELGGLLLSQFDLFAAATAAALVVLLSLLFNRTRIGLALRAVADDPRAAMSV 180

Query: 181 GINVALVLALAFGLSAAMGALAGVVATPITLTRYDIGTLFTLKGFAAAMLGGMGNPVGAV 240
           GI +  V A+ + ++  +G +AG++       ++ + +L  LK     ++GG  +  GA+
Sbjct: 181 GIRLPRVWAVVWAVAGFVGLVAGLLWGARLGVQFSL-SLVVLKALPVLIIGGFTSISGAI 239

Query: 241 VGGLLIGLIETFAAGY----LSSTYKDAVAFLMILVVLLFMPRGLFGSRTVERV 290
           VGGL+IG  E  A  Y    +    ++   +++ L+ LL  P GLFG R +ERV
Sbjct: 240 VGGLIIGASEKLAEVYFGPLIGGGIENWFPYVLALLFLLVRPAGLFGERAIERV 293