Pairwise Alignments

Query, 394 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

Subject, 381 a.a., ABC-type branched-chain amino acid transport systems, periplasmic component from Variovorax sp. SCN45

 Score =  160 bits (406), Expect = 4e-44
 Identities = 116/385 (30%), Positives = 184/385 (47%), Gaps = 14/385 (3%)

Query: 11  LRAAAIMLATAVAGPALTSPAFAADPIKIGSVVSATGPSAFLGDPEAKTLKLYVDELNKK 70
           L+   I+ ATA+A  A  + A AAD +KIG + S +GP A LG P  K ++  + E  + 
Sbjct: 3   LKLTHILGATALALTA--AQAMAAD-LKIGFISSLSGPVAALGIPYEKGIRAAIAEHPE- 58

Query: 71  GGLLGRPVELVLYDDGGDANKARTFATRLVEDDKVVAMVGGTSTGATMAMIPVFEEAGIP 130
             + GR V+L++ DD  D   A   A +LV +DKV  ++G +     MA+  V +E   P
Sbjct: 59  --IAGRKVQLIVLDDASDPTTAGRNARKLVTEDKVDVLIGTSGVPGAMAIAAVAKELNTP 116

Query: 131 FVSLAGGIEIIEPVRAFIFKTPHTDKTACQKIFEDMKARGITKIGMISGTDGFGKSMRNQ 190
            +S    + I  P  A+              + + MK  G+  +  I  +D  G    + 
Sbjct: 117 LISPTP-VTIAGPEGAWTVTVSQPFPLMVAGVVDRMKKSGVKTVAFIGFSDALGDLAYDS 175

Query: 191 CLKVIGQYGISVVADENYGATDSDMTPQLNKIKNTAGVEAVLNPGFGQGPAIVTRNYAQL 250
            +K     GI VVA+E Y  +DS +  Q+ KI   A  +AV     G   A+     A  
Sbjct: 176 LMKSADAAGIKVVANERYARSDSSVAGQVLKIV-AARPDAVFAGNSGTPGALPYIALADR 234

Query: 251 GIKLPLYQSHGVASKSFIELAGPAAEGVRLPAPAILIGDKLAANDPQKPVVAEYKTSYEK 310
           G K  +Y +HG+ +  F+ + G + EG+++P+  +L+ D+L  ++P K V   ++++Y+K
Sbjct: 235 GYKGKIYGTHGLINADFVRVGGASIEGLQVPSGPVLVADQLPDSNPIKKVSMGFRSAYQK 294

Query: 311 ATGQ-PVSTFGGYGYDGIQLVARAIESAKS-----ADPKKIRDALEATKGYVGVTGIYTF 364
             G  P   F  Y YD   L+A A    K      A    +RDA+ +TK  VG  G+Y F
Sbjct: 295 VNGAVPTDAFSSYTYDAYLLLADAASRTKGEPGTPAYRTALRDAIVSTKELVGTHGVYNF 354

Query: 365 APADHLGLGTDSFRMLVIRNGDWAI 389
            P D  G       ++ +  G W +
Sbjct: 355 KPDDRYGSDQRGVVIVQMTKGQWKL 379