Pairwise Alignments

Query, 485 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Xanthobacter sp. DMC5

Subject, 402 a.a., quality control serine endoprotease DegS from Pseudomonas putida KT2440

 Score =  270 bits (689), Expect = 9e-77
 Identities = 148/344 (43%), Positives = 210/344 (61%), Gaps = 17/344 (4%)

Query: 41  LTFAPVVAKTAPAVVNVYALKTAQQRVNPIFDDPFFRRFFGMPGPGGPGGPGDGPGLRAP 100
           +++A  V   APAV N+Y  K   +  +P+F+DP FRRFFG               L   
Sbjct: 69  VSYADAVTLAAPAVANLYTTKVVNKSAHPLFEDPQFRRFFG-------------DNLPKQ 115

Query: 101 ERVQRSLGSGVIVDPSGLVLTNYHVIEGADEIRIALNDRREYEAEVLLRDQRTDLAVLRI 160
            R + SLGS VI+ P G +LTN HV  GAD+I +AL D RE  A V+  D  TDLAVL+I
Sbjct: 116 RRWESSLGSAVIMSPEGYLLTNNHVTSGADQIVVALKDGRETLARVIGSDPETDLAVLKI 175

Query: 161 KTEAKERFPFLELGDSDSLAVGDLVLAIGDPFGVGQTVTQGIVSALARTQVGVSDYQFFI 220
             +     P + +G SD++ +GD+ LAIG+PFGVGQTVT GI+SA  R Q+G+++Y+ FI
Sbjct: 176 DLK---NLPAITIGRSDTIHIGDVSLAIGNPFGVGQTVTMGIISATGRNQLGLNNYEDFI 232

Query: 221 QTDAAINPGNSGGPLVDMAGRVVGINSAIYSRSGGSHGIGFAIPANMGRVVVEQAKSGSK 280
           QTDAAINPGNSGG LVD  G ++GIN+AI+S+SGGS GIGFAIP  +   V++      +
Sbjct: 233 QTDAAINPGNSGGALVDANGNLIGINTAIFSKSGGSQGIGFAIPVKLALEVMKSIVEHGQ 292

Query: 281 SVRRPWLGAKLQRVTPDIAESLGLPRPTGVLVQSVTAGSPAAKAGLRTGDLVVSVEGQGI 340
            V R WLG ++Q ++ ++AES G+    G++V  +    PAAKAGL  GD+++S+ G+  
Sbjct: 293 -VIRGWLGIEVQPLSQELAESFGMKDRPGIVVAGIFREGPAAKAGLHLGDVILSINGEPA 351

Query: 341 DDPESLNYRLATRPIGGRAALLVNRSGKDQTLVVVLEVAPETVP 384
            D      ++A      +  + V R+G+   L+  + + P   P
Sbjct: 352 GDGRKSMNQVARIKPNEKITIEVMRNGQQLKLIAEVGLRPPPAP 395



 Score = 38.5 bits (88), Expect = 4e-07
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 374 VVLEVAPETVPREELLLRGRSPFAGATIVNLSPAVAEELKVDTNATGVVVYDVQDNSPAA 433
           + LEV    V   +++ RG   + G  +  LS  +AE   +  +  G+VV  +    PAA
Sbjct: 279 LALEVMKSIVEHGQVI-RG---WLGIEVQPLSQELAESFGMK-DRPGIVVAGIFREGPAA 333

Query: 434 AAGFRPGDVIVEVNNEKVA-RTGDLNQLAAV-PQRGWRVTVLRGGRSITAV 482
            AG   GDVI+ +N E        +NQ+A + P     + V+R G+ +  +
Sbjct: 334 KAGLHLGDVILSINGEPAGDGRKSMNQVARIKPNEKITIEVMRNGQQLKLI 384