Pairwise Alignments

Query, 485 a.a., Periplasmic pH-dependent serine endoprotease DegQ from Xanthobacter sp. DMC5

Subject, 514 a.a., htrA family protein from Agrobacterium fabrum C58

 Score =  246 bits (627), Expect = 2e-69
 Identities = 171/494 (34%), Positives = 257/494 (52%), Gaps = 66/494 (13%)

Query: 6   SGLAAAAAFALLLGTPAFAQPA-AQQRVPASQAEVTLTFAPVVAKTAPAVVNVYALKTAQ 64
           S +AA A  AL+ G+ +    A AQ   P S A++     P++     AVVN+   +  +
Sbjct: 11  SSIAAVAGIALVAGSLSAPVAARAQSHGPESVADLA---EPLL----DAVVNISTSQNVK 63

Query: 65  QR----VNPIFDD-----PFFRRFFGMPGPGGPGGPGDGPGLRAPERVQRSLGSGVIVDP 115
                 V P   +      FF+ +F    P G             E+V  SLGSG ++DP
Sbjct: 64  TEGKGPVPPKLPEGSPFQEFFKDYFDSQKPEGG------------EKVN-SLGSGFVIDP 110

Query: 116 SGLVLTNYHVIEGADEIRIALNDRREYEAEVLLRDQRTDLAVLRIKTEAKERFPFLELGD 175
           +G V+TN HVIEGAD I +   +  + +A ++  D +TDL+VL++  E K     ++ GD
Sbjct: 111 AGYVVTNNHVIEGADAIEVIFPNGSKLKATLVGTDTKTDLSVLKV--EPKTPLKAVKFGD 168

Query: 176 SDSLAVGDLVLAIGDPFGVGQTVTQGIVSALARTQVGVSDYQFFIQTDAAINPGNSGGPL 235
           S S+ +GD V+A+G+PFG+G ++T G++SA  R  +    Y  FIQTDAAIN GNSGGPL
Sbjct: 169 SRSMRIGDWVMAVGNPFGLGGSLTVGVISARGRN-INAGPYDNFIQTDAAINKGNSGGPL 227

Query: 236 VDMAGRVVGINSAIYSRSGGSHGIGFAIPANMGRVVVEQAKSGSKSVRRPWLGAKLQRVT 295
            +M G V+GIN+AI S SGGS GIGFA+P  + + +V+Q     ++ RR WLG ++Q VT
Sbjct: 228 FNMKGEVIGINTAIISPSGGSIGIGFAVPTELAQNIVQQLIEFGET-RRGWLGVRVQPVT 286

Query: 296 PDIAESLGLPRPTGVLVQSVTAGSPAAKAGLRTGDLVVSVEGQGIDDPESLNYRLATRPI 355
            D+A SLG+    G L+  V  G P     ++ GD+V+  +G+ I++   L   +A  P+
Sbjct: 287 DDVAASLGMDSAKGALISGVAKGGPVENGPIQAGDVVLKFDGKDINEMRDLLRIVAESPV 346

Query: 356 GGRAALLVNRSGKDQTLVVVL------------------------EVAPETVPREELLLR 391
           G    ++V R GK++T+ V L                         VAP+     +   +
Sbjct: 347 GKEVDVVVYRDGKEETVKVKLGQLQDTTDEKASTDDPQGEDGDGSMVAPDDKDGGDDQAQ 406

Query: 392 GRSP--------FAGATIVNLSPAVAEELKVDTNATGVVVYDVQDNSPAAAAGFRPGDVI 443
            ++P          G  +V LS  +  E  +  +  GV+V  V   SPA   G + GDVI
Sbjct: 407 DQTPEVREAPQTVLGMNLVVLSNELRTEKGIAESVEGVLVASVDPGSPAEQKGMKAGDVI 466

Query: 444 VEVNNEKVARTGDL 457
           VEV  + +   GD+
Sbjct: 467 VEVGQDFMEVPGDV 480



 Score = 36.2 bits (82), Expect = 3e-06
 Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 273 EQAKSGSKSVR---RPWLGAKLQRVTPDIAESLGLPRPT-GVLVQSVTAGSPAAKAGLRT 328
           +QA+  +  VR   +  LG  L  ++ ++    G+     GVLV SV  GSPA + G++ 
Sbjct: 403 DQAQDQTPEVREAPQTVLGMNLVVLSNELRTEKGIAESVEGVLVASVDPGSPAEQKGMKA 462

Query: 329 GDLVVSVEGQGIDDPESLNYRL 350
           GD++V V    ++ P  +  R+
Sbjct: 463 GDVIVEVGQDFMEVPGDVLVRV 484