Pairwise Alignments

Query, 224 a.a., Transcriptional regulatory protein DegU from Xanthobacter sp. DMC5

Subject, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 5e-23
 Identities = 60/199 (30%), Positives = 98/199 (49%), Gaps = 10/199 (5%)

Query: 10  RLVIADDHPLFRGALREAVLGRSADARIEEVGTFDDLTALLERDQDF--DLILLDLTMPG 67
           RL++ DDH L R  +R  V         + VG  DD   LL++ +    D+ILLD++M  
Sbjct: 4   RLLLVDDHSLIRAGVRALVCDIPG---YDVVGEADDGNQLLDQVRTLAPDIILLDISMRS 60

Query: 68  ARGFSGLIYLRAQYMAIPVVVVSGNEEPAVIRRCLDLGASGFIPKSMSVGNMRDAVAQVL 127
             G   L  LRA      V+++S + +P +I R L+ GA G++ K  S   +  A+  V 
Sbjct: 61  TSGLDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVR 120

Query: 128 KGETFLPPD-----INVTTKADAETDAIIARLSTLTPQQVRVLMMLAEGRLNKQIAYELS 182
            GE +L P      IN   +   +          LT +Q+ +L ++  G+  ++IA  L 
Sbjct: 121 HGERYLSPAIAHTVINQALRHTKQGKPSAGERHNLTSRQLEILRLIVRGKSTREIAAGLG 180

Query: 183 VSEATVKAHVSAILQKLGV 201
           +S  TV+ H S I+++L +
Sbjct: 181 LSIKTVETHRSQIMKRLQI 199