Pairwise Alignments

Query, 415 a.a., Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein from Xanthobacter sp. DMC5

Subject, 404 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  134 bits (338), Expect = 4e-36
 Identities = 107/385 (27%), Positives = 182/385 (47%), Gaps = 11/385 (2%)

Query: 22  GAAGVGLIASPAIVRAQADTIRIGFPTPLTGPFG-AEAKDQVKSAELAVKLVNDKGGIAG 80
           GA  + L A PA+      T++IG  + ++GP+        V +A+LA+     K    G
Sbjct: 12  GAMALTLAAMPALAE---QTVKIGILSDMSGPYSDMGGPGSVAAAQLAIDDCQAKE-CKG 67

Query: 81  RKVELLVRDDKLNAGEAATRTLELIEKDKVHAVVGALSSAVQLAVNEVTRARGVIYVSIS 140
            KVELL  D +        +  E  + +KV+A+    +SAV L V ++T     I +   
Sbjct: 68  MKVELLSIDHQNKPDIGVQKAREWADVNKVNAIADLTNSAVALGVQKLTLDHDFIAMYSG 127

Query: 141 QSDTINEVKDFSKYTFHEALNPHMTTAAVARATFKKGSKV-ALLGADYAYGHEMMRGFKR 199
            + T    +D S   FH   + +   A  A+A  K G K    L  DYA+GH +      
Sbjct: 128 PATTKLTNEDCSATGFHWMFDTYALAAGSAQAITKMGGKSWYFLTVDYAFGHSLEADSMA 187

Query: 200 AAGELGAEIVGEILHPFGAADYSTLMPRIRSLKPDILAICNFGRDQANSIKQANDFGMKK 259
              +LG ++VG + HP  ++D S+ + + +S K  ++A+ N   D  N+IK A +FG+ +
Sbjct: 188 MVNQLGGKVVGSVRHPLNSSDMSSFLLQAQSSKAQVIALANGAADTINAIKTAREFGIVQ 247

Query: 260 QMQIVVPVLLHNQRI-AVAPDVFEGIIGGANYYWALENTIPSAKAFNDAYKAAY-GSLPT 317
             Q VVP+L+    I ++  D+ +G+     +YW  ++    A+AF   ++ A+    PT
Sbjct: 248 GGQQVVPLLIFLTDIRSLGLDIAQGLTFTEGFYWDQDD---QARAFAARFQKAFKDRKPT 304

Query: 318 DYGAYGFTGVSALLLAMAKAGGTDTDKVVEALEGLKYDVAKGPQYFRKCDHQSVQSVLVL 377
              A  ++ V   L A+A A  T++  V   +  L    A       + D + V  +L++
Sbjct: 305 MVQAGTYSSVLHYLRAVAAAKTTESKAVAAKMRELPISDAVMRNAAIRPDGRVVHDMLLV 364

Query: 378 KSKAKADMKSEQDLFDIVENVPGSE 402
           K K  A  K + D ++I   +P +E
Sbjct: 365 KVKTPAQSKGDWDFYNIQATIPAAE 389