Pairwise Alignments

Query, 290 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 326 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  173 bits (438), Expect = 5e-48
 Identities = 101/289 (34%), Positives = 162/289 (56%), Gaps = 19/289 (6%)

Query: 12  SGLALGAILVMVALGLTIVFGMLGIVNFAHGALFMVGAYA--------GLWIAAQTGSFW 63
           +GLA+G I+ ++A GLT+VFG++ ++NF HG    +GA+         G W  +  G  W
Sbjct: 36  AGLAMGMIIFIIASGLTLVFGLMDVLNFGHGVFIALGAFVASSVLGLMGDWTGS--GELW 93

Query: 64  W-------ALIVAPIAVGVLGMAIERFLIRPLYGRTPDDPLLLTFGLGYVLVETVRITFG 116
                   A++VA    G +G+A ERF++RP+YG+     +L+T G   +  E +++ +G
Sbjct: 94  RNLVAVFPAMLVAMAVAGAVGLAFERFIVRPVYGQHLKQ-ILITMGGMIIGEELIKVIWG 152

Query: 117 TDGIPFSAPDALQGVVDLGVGYFPIYRLFVVGVVAVILLLLWVALEKTRFGLIVRAGARD 176
              IP   P+AL+G + +G      YRL  V V  V+  +L   L +T+ GL++RAG +D
Sbjct: 153 PAQIPLPLPEALRGSLLVGDAAISKYRLLAVAVGVVVFGVLAWTLGRTKIGLLIRAGVQD 212

Query: 177 PLIMKVLGVDVSRLWLLVFGLGVGLTALGGVL-AAPMRNVSPEMGTLVLAEAFVVTVIGG 235
             +++ LG  + RL++ VF +G  L  LGGV+     +N+ P+MG  V    F+V +IGG
Sbjct: 213 REMVESLGYRIGRLFVGVFVVGSALAGLGGVMWGLFQQNLVPQMGAQVNVLIFIVIIIGG 272

Query: 236 MGSLLGAVVAGLLVGVAVSMTALFAPEMATIVMFGLMALILLVRPQGLF 284
           +GS  GA++  LLVG+  +      P +       LM  +LL RPQG++
Sbjct: 273 LGSTGGALIGALLVGLMTNYIGFLLPTLTQFASIFLMVAVLLWRPQGVY 321