Pairwise Alignments

Query, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 435 a.a., High-affinity branched-chain amino acid transport system permease protein BraE from Pseudomonas putida KT2440

 Score =  135 bits (341), Expect = 1e-36
 Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 18/314 (5%)

Query: 26  RWRVPLTIAVLAVLPFVLPSQALAVNVL--IYGLFTVGFNLLFGYTGLLSFGHAAFFGTG 83
           R+ +P  I +  V P       L V +L  IY L  +G N++ G  GLL  G+ AF+  G
Sbjct: 106 RYIIPALIVIAIVFPIFANKYLLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIG 165

Query: 84  AYLTGMAIAHLGFGWFPAMLTGIVGASLLSAVIGALSIRTRGIYFCMVTLALAQLVYYVA 143
           AY   +   +LG G++  +    + A+L   ++G   +R  G Y  +VTL   +++  V 
Sbjct: 166 AYGLALGYQYLGLGFWSVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVL 225

Query: 144 LQASGWTGGENGLR-------GFTVAKADLIG--------GFSVNLLNPLAKYYFIMFFA 188
                +TGG NG+        G    +    G        GF  N        Y ++F  
Sbjct: 226 NNWLSFTGGPNGMPAPSPTFFGLEFGRRAKDGGVPIHEFFGFEYNASLKFVFIYAVLFMV 285

Query: 189 ALALWFVS-RVLNSPFGAAIEAVRENETRARACGFDVERTKLLSFILSGALCGLAGTLSA 247
            LA+ ++  R+   P G A EA+RE+E   R+ G +    KL +F L  +  GLAG   A
Sbjct: 286 VLAVLYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTLGASTAGLAGVFFA 345

Query: 248 LHLSIVPLDALSVHTSSIVVMMTMLGGAGSFFGPFVGALVFLLIEDVASLWTTHWQLIVG 307
            +   V   + +   S++++ + +LGG GS  G  + A V  +  ++   ++ +  L+ G
Sbjct: 346 TYQGFVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSFSEYRVLLFG 405

Query: 308 IVFILFVLFLPKGI 321
           ++ +L +++ P+G+
Sbjct: 406 VLMVLMMIWRPRGL 419