Pairwise Alignments

Query, 335 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 329 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  172 bits (435), Expect = 1e-47
 Identities = 108/278 (38%), Positives = 151/278 (54%), Gaps = 4/278 (1%)

Query: 52  VLIYGLFTVGFNLLFGYTGLLSFGHAAFFGTGAYLTGMAIAHLGFGWFPAMLTGIVGA-S 110
           ++I  +  +  +LL G  GL+S GHAAFFG G Y+  +            +L   +GA +
Sbjct: 44  IMILAILAMSLDLLVGVAGLVSLGHAAFFGLGGYMLALLSPQYEAANAWVVLPAAMGAVA 103

Query: 111 LLSAVIGALSIRTRGIYFCMVTLALAQLVYYVALQASGWTGGENGLRGFTVAKADLIGGF 170
            +SAV+G L+IRT GIYF MVTLA  Q+ YY     S   GG +G   +     +  G  
Sbjct: 104 AVSAVVGFLAIRTAGIYFIMVTLAFGQMGYYF-FNDSKLAGGSDGAYIYVKPNVEAFGIT 162

Query: 171 SVNLLNPLAKYYFIM-FFAALALWFVSRVLNSPFGAAIEAVRENETRARACGFDVERTKL 229
            VNL +  A ++ ++    A+ LW +  VL SPFG  + A+  NE R R  GF+    KL
Sbjct: 163 LVNLESKQAFFFVVLGCLVAVYLW-LRVVLASPFGRVLAAIGVNEGRVRGLGFNPMVYKL 221

Query: 230 LSFILSGALCGLAGTLSALHLSIVPLDALSVHTSSIVVMMTMLGGAGSFFGPFVGALVFL 289
           ++F L+GAL GLAG L+A     V    L  H S  V++M +LGG G+ FGP +GA +  
Sbjct: 222 VAFALAGALAGLAGFLAATQYGFVSPAMLGWHQSGHVLVMVILGGMGTLFGPVLGAFILE 281

Query: 290 LIEDVASLWTTHWQLIVGIVFILFVLFLPKGIWGSLIQ 327
           L        T HW L +G++ I  VL LPKG+ G L+Q
Sbjct: 282 LAHFGLEAVTEHWLLPMGVLVITIVLALPKGVAGLLLQ 319