Pairwise Alignments

Query, 250 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 250 a.a., Branched-chain amino acid ABC transporter, ATP binding protein from Pseudomonas putida KT2440

 Score =  182 bits (463), Expect = 4e-51
 Identities = 99/248 (39%), Positives = 148/248 (59%), Gaps = 10/248 (4%)

Query: 4   LMEVTDVGRSFGGFVALAGISAKFERNKVTAVIGPNGAGKSTFFNVLSGVLQPSTGSIRF 63
           L+E   +  ++G F A+AG+  K     +  +IGPNGAGK++ F+ L+G  Q + G I F
Sbjct: 5   LLETRHLELAYGPFKAVAGVDLKVRAGTIHTIIGPNGAGKTSLFHCLTGERQATAGKILF 64

Query: 64  KGQELKGLKQHRFAHLGIARSYQITNLFPELSVEENVRVAAQ------ALKTRYDVFSHR 117
            GQ++     H    LG+ARS+Q+T+LF  LSV EN+R+AAQ      AL     V   R
Sbjct: 65  NGQDIIRKPSHGRVALGMARSFQLTSLFQNLSVRENLRLAAQGRDGLGALNFWRSVEHKR 124

Query: 118 DRYPELSQKAEAALGEVGLTHRRARRARDLAHGEQRALEIAIALVANPELLLLDEPTAGM 177
             +      A+  L  + L+ R    A +L+HG+QR LE+ +++ A P LL+LDEPT+GM
Sbjct: 125 SHW----NTADQVLERLKLSARAETLAGELSHGQQRVLEVGMSICAKPTLLMLDEPTSGM 180

Query: 178 GPEETKDMVALIERLAVDRTILLVEHKMKMILGLSDRILVLHHGRLIADGTPTAVQADPE 237
           G ++   M  LI  L  D T+LL+EH M +++ +S RI V+ HG+++ +GTP  V+ D  
Sbjct: 181 GIDDIPVMTDLISDLGRDHTVLLIEHNMSIVMSISQRITVMSHGQILVEGTPEQVRNDER 240

Query: 238 VRRVYLGQ 245
           VR  YLG+
Sbjct: 241 VRTAYLGE 248