Pairwise Alignments

Query, 293 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  165 bits (418), Expect = 1e-45
 Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 8/290 (2%)

Query: 3   VFLDVLLGGVFHAAILFLVAAGLQLVFGVQKVINLACGSFYALGAYFGITAVGLASAVGF 62
           ++L  LL G+    I FL+A GL ++FG+   +N A G+F+ LGAY   TAV    AV  
Sbjct: 4   LYLFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAV----AVTG 59

Query: 63  PAWTVLPVLVLAGLVIGLVGLPVERIL-RTVYRRDESYQLLLTFGLLLMFQDVFRFFWGA 121
             W  L   ++A LV+  +   VER+L + +Y    ++Q+L+T G+ L+ Q+     WG 
Sbjct: 60  NFWLAL---LIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGP 116

Query: 122 TPRTLDNAYLAYGTAEFLGLRVPTYNLLVIAASIAIAVALGAFLQRTRTGRIIRATAENR 181
             + +       G         P Y L +I  +  I + L   L+RTR G ++RA +E+ 
Sbjct: 117 VGKNIAVPPELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSEST 176

Query: 182 DMSEGLGVNSSRVFAAVFTVGCMLGTVGGALVVPASASSLDMAVELVVEAFAVVVIGGLG 241
           +    LG N  R+F+  F +G  L  V G L  P   +   +  E++  AF VVVIGG+G
Sbjct: 177 ETVSLLGTNIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMG 236

Query: 242 SMRGALAGALIVGLIRAAAIMVLPEAEILSIYLVVIAVLILRPAGLFGKA 291
           S  GAL G L+VG++++    + P+   L IY  + AV+++RP GLFG+A
Sbjct: 237 SFGGALVGGLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGRA 286