Pairwise Alignments

Query, 424 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 405 a.a., Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score = 89.7 bits (221), Expect = 1e-22
 Identities = 95/370 (25%), Positives = 166/370 (44%), Gaps = 22/370 (5%)

Query: 15  AGLAAAAPGVFSPAIAQSKPVRIGILAPRSGAMGTVGECGVRAVQWAAERMNKDGGIAGR 74
           A LA A PG+        K ++IG+ +P SGA    G   + A +   +++NK+GG+ GR
Sbjct: 22  AALAQAEPGL------TDKTIKIGMFSPMSGASMNYGFDVINAAKMYYDKINKEGGVNGR 75

Query: 75  PIELVFEEE-TSPKDTIERFRRLALQEKVDCVQGLISTGVSLGVAPVAEEEQALLIMWDG 133
            IELV E++  +  D +   ++L  Q++V  + G   +   +G     E  +  L+M + 
Sbjct: 76  KIELVVEDDRCNANDLLAAVKKLTEQDQVFLLNGGSCSAAVVGAREYVERAKIPLVMLNA 135

Query: 134 TTQDGVKEAMPKSRYVFRSTDNECEAVMASLLAIKYFKGKIKRIAGINPDYSYGRNNWEA 193
           +   G     P S+Y++ +      AV  S++       K K+I  IN D +YG  N E+
Sbjct: 136 S---GDGALYPPSKYIYGAFSISQHAVGGSMVQFASEHLKAKKIGYINHDDAYGGWNLES 192

Query: 194 FQ-QILKRAGVEVEVVAEQWPKVGTMDLTSHVAALKAAKPDFIFSSMLFADLPVFMKQGS 252
            Q Q     G++++V   Q       D+T+ +  +KAA PD +  +     + + +K+  
Sbjct: 193 AQAQAKALGGIDLQV---QSVNPNITDVTAPMLKIKAANPDVLLLTTYARPVSLIVKRAF 249

Query: 253 AAGLFEGVNLALPAAGWQINQLKKEFMPENIVFGHNTLYFALPN--ASPLQKAFVEDYMG 310
             G  + + LA+ +    + QL  E +     F +  +   L +    P  K   + Y  
Sbjct: 250 ELGFNKPIVLAVNSTA-DLKQL-VENVGNKDAFKNVYIQEVLADVPGGPKLKWVYDMYKA 307

Query: 311 RYKE-APHWEADRAYFALAAYKA-GVEAAAKATGRWPKLDEIIESIPKQKVES--LGGPG 366
            Y + A      +AY       A  V  A KA G  P  ++++ ++   K +S  + GP 
Sbjct: 308 AYPDLASKPGHPQAYMPYGIPPAMAVVNALKAAGPNPTREKVLAALSTMKFDSGVMAGPI 367

Query: 367 QFRADKIAEQ 376
           +F  D  A Q
Sbjct: 368 EFGPDDRAAQ 377