Pairwise Alignments

Query, 424 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 88/352 (25%), Positives = 155/352 (44%), Gaps = 21/352 (5%)

Query: 19  AAAPGVFSPAIAQSKPVRIGILAPRSGAMGTVGECGVRAVQWAAERMNKDGGIAGRPIEL 78
           A A GV S   A    V+IG+  P +GA    GE  ++  Q AA+++N  GG+ G  I L
Sbjct: 16  ATALGVSSYVQAD---VKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVL 72

Query: 79  V-FEEETSPKDTIERFRRLALQEKVDCVQGLISTGVSLGVAPVAE--EEQALLIMWDGTT 135
           V  ++   PK  +    RL  Q+K   V G++    S    P +E  +E  ++ +  G+T
Sbjct: 73  VKGDDACEPKQAVAVANRLVDQDK---VIGVVGHFCSSNTIPASEVYDEAGVIAITPGST 129

Query: 136 QDGVKEAMPKSRYVFRSTDNECEAVMASLLAIKYFKGKIKRIAGINPDYSYGRNNWEAFQ 195
              V E    + +     D++ + ++A    +   KG  K++A ++   +YG+   +A +
Sbjct: 130 NPQVTERGLSAMFRMCGRDDQ-QGIVAGDYIVDVLKG--KKVAVLHDKDTYGQGLADATK 186

Query: 196 QILKRAGVEVEVVAEQWPKVGTMDLTSHVAALKAAKPDFIFSSMLFADLPVFMKQGSAAG 255
             L++ GV+  V+ E   + G  D ++ V  +++   D ++   L  +    ++Q    G
Sbjct: 187 AQLEKRGVK-PVLYEGLTR-GEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQG 244

Query: 256 LFEGVNLALPAAGWQINQLKKEFMPENIVFGHNTLYFALPNASPLQKAFVEDYMGRYKEA 315
           L + V   +   G   ++L         V G    + A P   P  KA VE++     E 
Sbjct: 245 L-KDVKF-MSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTE- 301

Query: 316 PHWEADRAYFALAAYKAGVEAAAKATG----RWPKLDEIIESIPKQKVESLG 363
           P      AY +L A  A    A    G    +W K + +   + ++K +S G
Sbjct: 302 PEGYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGEKKWDSKG 353