Pairwise Alignments

Query, 338 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  211 bits (537), Expect = 2e-59
 Identities = 114/285 (40%), Positives = 163/285 (57%), Gaps = 3/285 (1%)

Query: 52  VSAEQYGALWTAAAEALDDEFFGLAARPMRCGSFTLLCHALMGAQTLEQALRRALRFLRV 111
           V A+ +  LW A  + LDDEFFGL +  M  GSF L+C  L+    LE+ALR+ +    +
Sbjct: 47  VPAKAFAQLWLALIQRLDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGL 106

Query: 112 VLDDPSGELVVGDGLASVVLSDRGA--ARSAFAYRTYWIILHGITCWLVGRRIPIRQVDF 169
            L D  G L V  G A + +    A      +A  TY +++ G+ CWL GRRI I + + 
Sbjct: 107 FLRDLRGSLTVRGGRAVISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTEL 166

Query: 170 RCGPPEHGADYRLFFGAPVRFDAPESRLAFDATFLKLPAHRSERALRDFLRGAPANILVR 229
               P    D  L +G  +R  +  + + FD+ +L+LP  +   AL+ FLR AP  +++R
Sbjct: 167 AVSRPAQEDDL-LLWGPDLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIR 225

Query: 230 YRHDEGLAARVRARLRELPASAWPSFVELARQLRLPASTLRRRLAEEGAAYRDIKDDLRR 289
           +R+  GL A V   LR L    WP+   LA+Q  + AST RR+L  EG +Y+ IKD++RR
Sbjct: 226 FRNQNGLVAEVYRHLRALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRR 285

Query: 290 LRAEDLLRDTDRPVGEIAAELGFSEPSAFHRAFRKWTDLSPGAFR 334
             A + LR+    + EIA + GF EPSAFHRAF+KWT  SPG++R
Sbjct: 286 AMAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYR 330