Pairwise Alignments

Query, 337 a.a., Dipeptide transport system permease protein DppB from Xanthobacter sp. DMC5

Subject, 313 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  240 bits (613), Expect = 3e-68
 Identities = 132/334 (39%), Positives = 198/334 (59%), Gaps = 22/334 (6%)

Query: 1   MLKLLGSRLATAVPSLIGVVIVTFLLTRVLPGDTAAYFAGPAATPQAIAEIRTKLGLDKS 60
           ML+L+  RL  AVP+L+ V ++ F L ++LPGD     AG    P  IA++R +L LD  
Sbjct: 1   MLELICKRLLLAVPTLLLVSMMVFGLQKLLPGDPLIAMAGEERDPAVIAQLRAELNLDAP 60

Query: 61  LPAQFADYVSALAHGDLGSSLSTGQPVATEIASRLPASAELTLAGLVLALLIAVPFGIMA 120
           +P Q+  +++    GDLG SL T +PV   IAS+LP + EL+L  +++AL+  +  GI+A
Sbjct: 61  IPVQYFHWLTRALQGDLGVSLRTHEPVTQLIASKLPVTLELSLLAMIIALVFGISMGILA 120

Query: 121 AVRQGSWIDHACRIITTAGVSLPVFFTGLLLVYVFYFKLGWAPAPLGRLDVFFSAPETVT 180
           AV + SW+DH    +  +G+S+P F+ G+LL+ VF   L W PA               +
Sbjct: 121 AVNKNSWVDHGANFVAISGISIPHFWLGILLILVFSVNLQWLPA---------------S 165

Query: 181 GFYLIDSLIARDFETFRAALAQLAVPAITLAIFALAPIARMTRASMLAVLSSEFVRTAKA 240
           G+        ++  T       L +PA  L     A + R TRASM+AVL ++++RTA+A
Sbjct: 166 GYVPFSEDPIQNLRT-------LLLPASVLGTGLAATLMRHTRASMIAVLKADYIRTARA 218

Query: 241 AGLTDYTVIITYAFRNAMLPVVTTLGMVFSFLLGANVLVEKVFAWPGIGSYAVEALITSD 300
            GL    VI+ +AFRNA++PV+T   ++F  LLG  VL E+VF  PG G   V+++   D
Sbjct: 219 KGLLPKAVILKHAFRNALVPVITLTTLLFGELLGGAVLTEQVFTIPGFGKMIVDSVFNRD 278

Query: 301 YAPVQGFVLAMAILYVILNLLIDLAYGIIDPRAR 334
           YA VQG VL +AI +++LNLL D+ Y +I+P+ R
Sbjct: 279 YAVVQGVVLIVAIGFLMLNLLADVLYVLINPKMR 312