Pairwise Alignments

Query, 295 a.a., putative D,D-dipeptide transport system permease protein DdpC from Xanthobacter sp. DMC5

Subject, 308 a.a., dipeptide ABC transporter - putative membrane subunit from Pseudomonas putida KT2440

 Score =  205 bits (522), Expect = 9e-58
 Identities = 112/268 (41%), Positives = 157/268 (58%), Gaps = 9/268 (3%)

Query: 31  VTGIAFGMFLVLVVCATFGPFIVPYDPLASDTAAALQPP---SAAHW---FGTDNLGRDI 84
           V G+AF    ++V CA F P++ P+DP        L PP       W    GTD LGRD+
Sbjct: 39  VMGLAF--MCLVVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGGTWQFILGTDELGRDL 96

Query: 85  FSRVVVASRLDMAIAIFSVALVFAVGGVAGIASGFFGGWTDRIIGRISDTIMAFPLFVLA 144
            SR++  +RL + I + SV +    G + G+ +GFF       I R+ D ++A P  +LA
Sbjct: 97  LSRLIQGARLSLLIGLSSVVMSLIPGILLGLLAGFFPQLLGPSIMRLMDVMLALPSLLLA 156

Query: 145 MGIVAALGNTVTNIVIATAIINFPLYVRVAKSEAAIRRNAGYVQAARLTGNSEWRILLTT 204
           + IVA LG  + N VIA AI++ P YVR+ ++      N  YV AARL G    R++  T
Sbjct: 157 VAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTAARLAGAGLPRLMFVT 216

Query: 205 ILPNIMPIMMVQMSLTMGYAILNAAGLSFIGLGVRPPTPEWGIMVAEGSAYIVSGEWWIA 264
           +LPN M  ++VQ +L+   AIL+AA L F+GLGV+PPTPEWG M+A    YI    WW+ 
Sbjct: 217 VLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTMLASARDYI-ERAWWVV 275

Query: 265 LFPGLALMFAVFCFNLLGDGLRDIVDPQ 292
             PGL ++ +V   NL+GDGLRD +DP+
Sbjct: 276 SLPGLTILLSVLAINLMGDGLRDALDPK 303