Pairwise Alignments

Query, 293 a.a., HTH-type transcriptional regulator YofA from Xanthobacter sp. DMC5

Subject, 293 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  160 bits (406), Expect = 2e-44
 Identities = 98/284 (34%), Positives = 150/284 (52%), Gaps = 6/284 (2%)

Query: 3   AMLDPDQLKTFVAIAETGSFTKAAEVVHKTQSAVSMQMKRLEERVGRPVFVRDGRASRLT 62
           A+ D D L+  V +A+ GSFT AA  +H TQS +S +++RLE+ VG  + VR  R    T
Sbjct: 10  ALFDLDLLRAIVVVADCGSFTTAAARLHSTQSTISQKVRRLEDMVGHRLLVRGNRDVLPT 69

Query: 63  EDGERLLDYARRIVKLNMEAVSSFADAELSGRVCLGVPDDYADRYLPDIMARFSRTHPSV 122
           + G+ LL YAR ++ LN + + + A A +   V LGVP+D+      + ++ FSR HP V
Sbjct: 70  DAGQTLLGYARHMLALNDQMLEALAGAMVGTTVRLGVPEDFVGGRTTNALSAFSRLHPQV 129

Query: 123 ELTVICEPTAELVQYIASGTIDLAIITATEITSRNAHVIRRERLLWVSSARHAAHLETPV 182
           +L V      +L Q   +G +DL ++      SR       ERL W+ SAR  A    P+
Sbjct: 130 KLEVTSGLCRDLSQAYDNGELDLVLLKQRR-NSREGVACWPERLQWIDSARTPAFELDPI 188

Query: 183 PLALGRPTCQWREIAVSRLAGAGRGHRILYTSPNCGAVVAAVLSGLAVSVLPESALRTGM 242
           PL    P   +RE  ++ + G GR  RI +TS +   + AAV  G+ +S+LP  A     
Sbjct: 189 PLVTFPPRGLYREDMINAIEGMGRRWRISFTSSSLSGIQAAVADGMGISLLPPRAATGEH 248

Query: 243 RVLGAAEGYPPLPPCDIGLLRNRHEPSPLADALAQHIVQGLDNL 286
           RVLGA +G P +   +I ++       P AD + + + + +  L
Sbjct: 249 RVLGAGQGLPEVDSYEIVIVHR-----PTADVMVKALAEVMTQL 287