Pairwise Alignments

Query, 899 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5

Subject, 795 a.a., Sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  253 bits (647), Expect = 3e-71
 Identities = 155/393 (39%), Positives = 220/393 (55%), Gaps = 13/393 (3%)

Query: 508 MTEQRALEVQFAQSQKLQAVGHLAGGVAHDFNNVLTAIIGYCDLL---LAKHRPSDPSFP 564
           + E+  +E    Q Q+L+AVG L  GVAHDFNN+LT I+     L   LAK    D +  
Sbjct: 409 INERERIEAALQQMQRLEAVGQLTAGVAHDFNNLLTVILTGASFLERDLAK-ADLDKART 467

Query: 565 DIMQIKQNANRAAGLVRQLLAFSRRQTLRPQVIELGDVISDAAALLRRLIGERITLDVEH 624
            +  I++   R A L  QLLAFSRRQ L P  + L   ++    LLRR +G  I++ ++ 
Sbjct: 468 RLTHIREAGERGAKLTSQLLAFSRRQRLEPVPLNLNRTLAGLEELLRRTLGGNISVRLDL 527

Query: 625 ARDLWPVKVDVNQFEQVIVNLAVNARDAMPDGGTLTIRTGNVPAAGCAAYGQGLPEGDYV 684
              LW    D  Q E +I+NLA+NARDAM DGG LT+ T N          +    G+YV
Sbjct: 528 DLALWQALTDPTQTEMIILNLAINARDAMSDGGQLTLTTRNTLIDKRPQRPEDPDPGEYV 587

Query: 685 MVEVVDTGTGIPPDIMDKIFEPFFSTKEVGKGTGLGLSTVYGIVQQTGGTILADSEMGRG 744
           M+ + DTG G+  +++ K+FEPFF+TK++GKG+GLGL+ V+G  +Q+GG +  D+ +GRG
Sbjct: 588 MLSIRDTGCGMSEEVLAKVFEPFFTTKDIGKGSGLGLAQVFGFAKQSGGGVRIDTTLGRG 647

Query: 745 TTFRVFLPRHVAGTEEEEAPKPAEPEPKAGDTTGQGRRVLLVEDEDAVRAFASRALANRG 804
           T   V+LP      E    P PA       + +G  R VLLV+D+  VR      L   G
Sbjct: 648 TEVAVYLP--AVKEEMVNEPVPAVLSQSISE-SGHNRTVLLVDDDHLVRDMLGDVLRQYG 704

Query: 805 YEVLAAASGVEALELIEREGKVDLVISDVVMPEMDGPTLLRELRSREPGLKVIFISGYAE 864
           Y+V  A SG +AL L++ +  +DL+++D  MPE +G  L    R R P L V+F++GYA 
Sbjct: 705 YQVRQAHSGEQALALLDDD--IDLLLTDFAMPEFNGAQLALAARERYPRLPVVFLTGYA- 761

Query: 865 EAFARNLPPSEHFSFLPKPFSLKQLVAAVSETL 897
           E     LP S     + KP    +L  A++E L
Sbjct: 762 ELQGLELPGS---LVIQKPVQADELARALNEML 791



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 782 RVLLVEDEDAVRAFASRALANRGYEVLAAASGVEA-LELIEREGKVDLVISDVVMPEMDG 840
           ++L+VED           L   G  V +      A +E   R+ + DL++ D V+P   G
Sbjct: 7   KLLMVEDSSMDAELTLMRLERSGLHVQSQLVFDHAGVEHALRQARYDLILCDCVLPGSSG 66

Query: 841 PTLLRELRSREPGLKVIFISG-YAEE 865
             +L   +   P +  IF+SG Y EE
Sbjct: 67  TEVLAIAQRLAPDIPFIFLSGIYGEE 92